RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 BAIAP2L1Q9UHR4 511 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 NID2Q14112 1375 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 LRRC55Q6ZSA7 311 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 TADA2BQ86TJ2 420 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 CASKIN2Q8WXE0 1202 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 ATP6V1G3Q96LB4 118 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 TBK1Q9UHD2 729 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 SEPT9Q9UHD8 586 aaPredicted RBP16.71■□□□□ 0.27
AP4E1-202ENST00000558439 GRID2IPA4D2P6 1211 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 ACSL3O95573 720 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 MAPK4P31152 587 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 KCNMA1Q12791 1236 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 RINT1Q6NUQ1 792 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 MCF2L2Q86YR7 1114 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 CERS5Q8N5B7 392 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 XXYLT1Q8NBI6 393 aa16.71■□□□□ 0.27
AP4E1-202ENST00000558439 RNPC3Q96LT9 517 aaKnown RBP16.71■□□□□ 0.27
AP4E1-202ENST00000558439 FAM153BP0C7A2 387 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 FAM153CQ494X1 144 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 SGO2Q562F6 1265 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 FAM153AQ9UHL3 310 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 COL1A1P02452 1464 aaPredicted RBP16.7■□□□□ 0.26
AP4E1-202ENST00000558439 FAM86B1E9PN63 330 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 FAM86B2P0C5J1 330 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 VAMP7P51809 220 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 AMIGO3Q86WK7 504 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 NEK9Q8TD19 979 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 PLCB1Q9NQ66 1216 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 AGTPBP1Q9UPW5 1226 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 IKBKGQ9Y6K9 419 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 SSTR3P32745 418 aaPredicted RBP16.7■□□□□ 0.26
AP4E1-202ENST00000558439 ZKSCAN8Q15776 578 aaPredicted RBP16.7■□□□□ 0.26
AP4E1-202ENST00000558439 MUM1L1Q5H9M0 696 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 TAOK1Q7L7X3 1001 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 RFFLQ8WZ73 363 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 DNAJC19Q96DA6 116 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 PITPNM2Q9BZ72 1349 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 ATP2A1O14983 1001 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 NKRFO15226 690 aaKnown RBP eCLIP16.7■□□□□ 0.26
AP4E1-202ENST00000558439 THAP12O43422 761 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 NSFP46459 744 aaKnown RBP16.7■□□□□ 0.26
AP4E1-202ENST00000558439 DDR1Q08345 913 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 MTMR1Q13613 665 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 COG2Q14746 738 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 TMEM119Q4V9L6 283 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 INTS8Q75QN2 995 aaKnown RBP16.7■□□□□ 0.26
AP4E1-202ENST00000558439 FLAD1Q8NFF5 587 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 DEPTORQ8TB45 409 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 PRMT6Q96LA8 375 aaPredicted RBP16.7■□□□□ 0.26
AP4E1-202ENST00000558439 HEMGNQ9BXL5 484 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 OSGEPQ9NPF4 335 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 LRRC4BQ9NT99 713 aa16.7■□□□□ 0.26
AP4E1-202ENST00000558439 TMOD1P28289 359 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 STRIP1Q5VSL9 837 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 MLXIPLQ9NP71 852 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 ZNF277Q9NRM2 450 aaPredicted RBP16.69■□□□□ 0.26
AP4E1-202ENST00000558439 PARP2Q9UGN5 583 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 PASKQ96RG2 1323 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 ATMINO43313 823 aaPredicted RBP16.69■□□□□ 0.26
AP4E1-202ENST00000558439 CYP4F22Q6NT55 531 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 TSEN2Q8NCE0 465 aaKnown RBP16.69■□□□□ 0.26
AP4E1-202ENST00000558439 EIF3HO15372 352 aaKnown RBP eCLIP16.69■□□□□ 0.26
AP4E1-202ENST00000558439 KRT19P08727 400 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 KRT15P19012 456 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 MTERF2Q49AM1 385 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 GLG1Q92896 1179 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 CEP83Q9Y592 693 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 SPEF2Q9C093 1822 aa16.69■□□□□ 0.26
AP4E1-202ENST00000558439 CYP26A1O43174 497 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 TRPC3Q13507 836 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 LMBRD2Q68DH5 695 aaPredicted RBP16.68■□□□□ 0.26
AP4E1-202ENST00000558439 FAM163AQ96GL9 167 aaPredicted RBP16.68■□□□□ 0.26
AP4E1-202ENST00000558439 RMDN3Q96TC7 470 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 IKZF4Q9H2S9 585 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 GPC5P78333 572 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 APOBEC3HQ6NTF7 200 aaKnown RBP16.68■□□□□ 0.26
AP4E1-202ENST00000558439 HAUS6Q7Z4H7 955 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 SLC30A5Q8TAD4 765 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 BAP1Q92560 729 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 PPP1R11O60927 126 aaPredicted RBP16.68■□□□□ 0.26
AP4E1-202ENST00000558439 PRLRP16471 622 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 RHOT2Q8IXI1 618 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 SYN2Q92777 582 aaPredicted RBP16.68■□□□□ 0.26
AP4E1-202ENST00000558439 STK33Q9BYT3 514 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 VPS37BQ9H9H4 285 aa16.68■□□□□ 0.26
AP4E1-202ENST00000558439 TBX3O15119 743 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 ITGA4P13612 1032 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 STX2P32856 288 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 POLGP54098 1239 aaPredicted RBP16.67■□□□□ 0.26
AP4E1-202ENST00000558439 PASD1Q8IV76 773 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 TPCN2Q8NHX9 752 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 LRRC15Q8TF66 581 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 EML1O00423 815 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 PPP1R37O75864 691 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 SYF2O95926 243 aaKnown RBP16.67■□□□□ 0.26
AP4E1-202ENST00000558439 EZRP15311 586 aaKnown RBP16.67■□□□□ 0.26
AP4E1-202ENST00000558439 NF2P35240 595 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 CCDC38Q502W7 563 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 SLC27A3Q5K4L6 730 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 AGBL1Q96MI9 1066 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms