RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 RUSC1Q9BVN2 902 aa13.72□□□□□ -0.21
TPM1-209ENST00000558072 ZHX3Q9H4I2 956 aa13.72□□□□□ -0.21
TPM1-209ENST00000558072 PDLIM7Q9NR12 457 aa13.72□□□□□ -0.21
TPM1-209ENST00000558072 MAN1B1Q9UKM7 699 aa13.72□□□□□ -0.21
TPM1-209ENST00000558072 UBE4BO95155 1302 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 IGKV6-21A0A0C4DH24 114 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 BICDL2A1A5D9 508 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 C17orf102A2RUQ5 167 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 PSMA7O14818 248 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 KLRC4O43908 158 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 HIP1RO75146 1068 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 ASGR1P07306 291 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 GJB1P08034 283 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 PRR29P0C7W0 189 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 ERCC5P28715 1186 aaPredicted RBP13.71□□□□□ -0.21
TPM1-209ENST00000558072 TPM4P67936 248 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 POU5F1BQ06416 359 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 COASYQ13057 564 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 HIC1Q14526 733 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 GRIK4Q16099 956 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 ODR4Q5SWX8 454 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 CCSAPQ6IQ19 270 aaPredicted RBP13.71□□□□□ -0.21
TPM1-209ENST00000558072 TAF2Q6P1X5 1199 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 RSPH3Q86UC2 560 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 FAM178BQ8IXR5 827 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 NME8Q8N427 588 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 ANKLE1Q8NAG6 615 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 TRAPPC12Q8WVT3 735 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 VTI1AQ96AJ9 217 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 HVCN1Q96D96 273 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 DHTKD1Q96HY7 919 aaPredicted RBP13.71□□□□□ -0.21
TPM1-209ENST00000558072 NTPCRQ9BSD7 190 aaKnown RBP13.71□□□□□ -0.21
TPM1-209ENST00000558072 TMEM106CQ9BVX2 250 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 C2orf40Q9H1Z8 148 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 MRPL44Q9H9J2 332 aaKnown RBP13.71□□□□□ -0.21
TPM1-209ENST00000558072 OGDHLQ9ULD0 1010 aa13.71□□□□□ -0.21
TPM1-209ENST00000558072 SMTNL1A8MU46 457 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 EIF3DO15371 548 aaKnown RBP eCLIP13.7□□□□□ -0.22
TPM1-209ENST00000558072 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
TPM1-209ENST00000558072 SMIM10L2AP0DMW4 78 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 SMIM10L2BP0DMW5 78 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 EN2P19622 333 aaPredicted RBP13.7□□□□□ -0.22
TPM1-209ENST00000558072 KLRC1P26715 233 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 NAMPTP43490 491 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 EFNA5P52803 228 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 ACLYP53396 1101 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 SNRPFP62306 86 aaKnown RBP13.7□□□□□ -0.22
TPM1-209ENST00000558072 FOXR2Q6PJQ5 311 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 FAM43BQ6ZT52 329 aaPredicted RBP13.7□□□□□ -0.22
TPM1-209ENST00000558072 GOLGA5Q8TBA6 731 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 KCNN1Q92952 543 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 BPIFA3Q9BQP9 254 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 ST6GALNAC4Q9H4F1 302 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 TMEM206Q9H813 350 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 CGNQ9P2M7 1197 aaKnown RBP13.7□□□□□ -0.22
TPM1-209ENST00000558072 EXOC7Q9UPT5 735 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 PCDHA2Q9Y5H9 948 aa13.7□□□□□ -0.22
TPM1-209ENST00000558072 KAT6AQ92794 2004 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 SMIM35A0A1B0GVV1 85 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 BIN1O00499 593 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 SGPL1O95470 568 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 FGFR1OPO95684 399 aaKnown RBP13.69□□□□□ -0.22
TPM1-209ENST00000558072 ARL2P36404 184 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 ZNF200P98182 395 aaPredicted RBP13.69□□□□□ -0.22
TPM1-209ENST00000558072 EHHADHQ08426 723 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 PCBP1Q15365 356 aaKnown RBP eCLIP13.69□□□□□ -0.22
TPM1-209ENST00000558072 EFCAB12Q6NXP0 572 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 MTHFD1LQ6UB35 978 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 ZBTB8OSQ8IWT0 167 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 MYOCDQ8IZQ8 938 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 GUF1Q8N442 669 aaKnown RBP13.69□□□□□ -0.22
TPM1-209ENST00000558072 METTL13Q8N6R0 699 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 CEP89Q96ST8 783 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 TSG101Q99816 390 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 INO80BQ9C086 356 aaPredicted RBP13.69□□□□□ -0.22
TPM1-209ENST00000558072 CRISPLD2Q9H0B8 497 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 KMT5AQ9NQR1 393 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 PHF24Q9UPV7 400 aa13.69□□□□□ -0.22
TPM1-209ENST00000558072 GRIN2DO15399 1336 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 MROH7Q68CQ1 1323 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 A0A0U1RQG5 324 aaPredicted RBP13.68□□□□□ -0.22
TPM1-209ENST00000558072 A0A1W2PQ45 241 aaPredicted RBP13.68□□□□□ -0.22
TPM1-209ENST00000558072 A0A1W2PQY0 241 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
TPM1-209ENST00000558072 BECN2A8MW95 431 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 C22orf31O95567 290 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
TPM1-209ENST00000558072 IGBP1P78318 339 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 RAD51AP2Q09MP3 1159 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 ZNF410Q86VK4 478 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 DEPTORQ8TB45 409 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 FUCA2Q9BTY2 467 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 NFKBIZQ9BYH8 718 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 POLR3FQ9H1D9 316 aaPredicted RBP13.68□□□□□ -0.22
TPM1-209ENST00000558072 SUGCTQ9HAC7 445 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 POLD4Q9HCU8 107 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 STARD7Q9NQZ5 370 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms