RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 GINS2Q9Y248 185 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 UMODL1Q5DID0 1318 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.59■■□□□ 1.37
CASC4-204ENST00000557945 M0QZ92 97 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 CAND2O75155 1236 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 ZNF202O95125 648 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 SLFN14P0C7P3 912 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 CYP2C18P33260 490 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 MRPS6P82932 125 aaKnown RBP23.59■■□□□ 1.37
CASC4-204ENST00000557945 FAM160A1Q05DH4 1040 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 ARSHQ5FYA8 562 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 ZNF618Q5T7W0 954 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 RPAINQ86UA6 219 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 PRPF31Q8WWY3 499 aaKnown RBP23.59■■□□□ 1.37
CASC4-204ENST00000557945 ZNF668Q96K58 619 aaPredicted RBP23.59■■□□□ 1.37
CASC4-204ENST00000557945 SCLT1Q96NL6 688 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 MAGEF1Q9HAY2 307 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 ZMYND8Q9ULU4 1186 aaPredicted RBP23.59■■□□□ 1.37
CASC4-204ENST00000557945 NR2E3Q9Y5X4 410 aa23.59■■□□□ 1.37
CASC4-204ENST00000557945 PITPNM1O00562 1244 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 ACTN4O43707 911 aaKnown RBP23.58■■□□□ 1.37
CASC4-204ENST00000557945 HIP1RO75146 1068 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 SELPP16109 830 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 SYN1P17600 705 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 LIG1P18858 919 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 GUCY2CP25092 1073 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 CCL23P55773 120 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 CACNB1Q02641 598 aaPredicted RBP23.58■■□□□ 1.37
CASC4-204ENST00000557945 RBL2Q08999 1139 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 LRRC8DQ7L1W4 858 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 FMR1NBQ8N0W7 255 aaPredicted RBP23.58■■□□□ 1.37
CASC4-204ENST00000557945 TIPINQ9BVW5 301 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 LRRC27Q9C0I9 530 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 TNMDQ9H2S6 317 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 CDY2AQ9Y6F7 541 aa23.58■■□□□ 1.37
CASC4-204ENST00000557945 MYMKA6NI61 221 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 RSPH10B2B2RC85 870 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 TIMP1P01033 207 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 RSPH10BP0C881 870 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 ARL2P36404 184 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 AFMP43652 599 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 NLRP11P59045 1033 aaKnown RBP23.57■■□□□ 1.36
CASC4-204ENST00000557945 AMPD3Q01432 767 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 LAMTOR4Q0VGL1 99 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 KIZQ2M2Z5 673 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 DYMQ7RTS9 669 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 KSR1Q8IVT5 923 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 CNNM3Q8NE01 707 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 ASAP3Q8TDY4 903 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 NLRP7Q8WX94 980 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 KIFAP3Q92845 792 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 NLRP4Q96MN2 994 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 LMBRD1Q9NUN5 540 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 KBTBD4Q9NVX7 518 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 COL4A3BPQ9Y5P4 624 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 TRPV2Q9Y5S1 764 aa23.57■■□□□ 1.36
CASC4-204ENST00000557945 SRGAP2CP0DJJ0 459 aa23.56■■□□□ 1.36
CASC4-204ENST00000557945 GPC3P51654 580 aa23.56■■□□□ 1.36
CASC4-204ENST00000557945 MXD4Q14582 209 aaPredicted RBP23.56■■□□□ 1.36
CASC4-204ENST00000557945 GRAMD1CQ8IYS0 662 aa23.56■■□□□ 1.36
CASC4-204ENST00000557945 ENGASEQ8NFI3 743 aa23.56■■□□□ 1.36
CASC4-204ENST00000557945 DDX12PQ92771 950 aa23.56■■□□□ 1.36
CASC4-204ENST00000557945 DRC1Q96MC2 740 aa23.56■■□□□ 1.36
CASC4-204ENST00000557945 REEP2Q9BRK0 252 aa23.56■■□□□ 1.36
CASC4-204ENST00000557945 CELF4Q9BZC1 486 aaKnown RBP23.56■■□□□ 1.36
CASC4-204ENST00000557945 ZHX3Q9H4I2 956 aa23.56■■□□□ 1.36
CASC4-204ENST00000557945 PCDH10Q9P2E7 1040 aa23.56■■□□□ 1.36
CASC4-204ENST00000557945 ASAP2O43150 1006 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 TBCAO75347 108 aaKnown RBP23.55■■□□□ 1.36
CASC4-204ENST00000557945 NR1I2O75469 434 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 CHRNA1P02708 482 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 IQCF3P0C7M6 154 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 GLRA2P23416 452 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 ITGB8P26012 769 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 CDC42EP1Q00587 391 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 SNW1Q13573 536 aaKnown RBP23.55■■□□□ 1.36
CASC4-204ENST00000557945 GIT2Q14161 759 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 KRBA2Q6ZNG9 492 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 PAGE5Q96GU1 130 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 SCLYQ96I15 445 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 WNT8AQ9H1J5 351 aa23.55■■□□□ 1.36
CASC4-204ENST00000557945 SFI1A8K8P3 1242 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 GPR32O75388 356 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 FAM13AO94988 1023 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 MGAT3Q09327 533 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 TFDP1Q14186 410 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 FAM26DQ5JW98 314 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 TRAF7Q6Q0C0 670 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 DAW1Q8N136 415 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 ZNF710Q8N1W2 664 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 CCDC34Q96HJ3 373 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 IFT74Q96LB3 600 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 OSMRQ99650 979 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 CDHR5Q9HBB8 845 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 ODF2LQ9ULJ1 636 aa23.54■■□□□ 1.36
CASC4-204ENST00000557945 A0A087WZ62 844 aa23.53■■□□□ 1.36
CASC4-204ENST00000557945 KINO60870 393 aaKnown RBP23.53■■□□□ 1.36
CASC4-204ENST00000557945 IDEP14735 1019 aa23.53■■□□□ 1.36
CASC4-204ENST00000557945 MCM4P33991 863 aa23.53■■□□□ 1.36
CASC4-204ENST00000557945 CRYBB1P53674 252 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 328.4 ms