RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 GHRP10912 638 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 KLRC1P26715 233 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 KRT2P35908 639 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 DEFB103AP81534 67 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 HTRA4P83105 476 aaPredicted RBP12.85□□□□□ -0.35
LINC00648-204ENST00000557749 TAP1Q03518 808 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 PAK2Q13177 524 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 AAK1Q2M2I8 961 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 MSS51Q4VC12 460 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 RUFY4Q6ZNE9 571 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 MIER3Q7Z3K6 550 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 SLFN12Q8IYM2 578 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 TOP1MTQ969P6 601 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 ZSCAN31Q96LW9 406 aaPredicted RBP12.85□□□□□ -0.35
LINC00648-204ENST00000557749 MBOAT7Q96N66 472 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 LLPHQ9BRT6 129 aaKnown RBP12.85□□□□□ -0.35
LINC00648-204ENST00000557749 CELF4Q9BZC1 486 aaKnown RBP12.85□□□□□ -0.35
LINC00648-204ENST00000557749 SH2B1Q9NRF2 756 aaPredicted RBP12.85□□□□□ -0.35
LINC00648-204ENST00000557749 GABBR1Q9UBS5 961 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 LIMCH1Q9UPQ0 1083 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 TELO2Q9Y4R8 837 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 PPME1Q9Y570 386 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 CFAP99D6REC4 459 aa12.84□□□□□ -0.35
LINC00648-204ENST00000557749 GPR182O15218 404 aa12.84□□□□□ -0.35
LINC00648-204ENST00000557749 BAG4O95429 457 aaKnown RBP12.84□□□□□ -0.35
LINC00648-204ENST00000557749 STAG3L1P0CL83 205 aa12.84□□□□□ -0.35
LINC00648-204ENST00000557749 HMGN5P82970 282 aaKnown RBP12.84□□□□□ -0.35
LINC00648-204ENST00000557749 LPIN1Q14693 890 aa12.84□□□□□ -0.35
LINC00648-204ENST00000557749 LETM2Q2VYF4 491 aa12.84□□□□□ -0.35
LINC00648-204ENST00000557749 RETREG3Q86VR2 466 aa12.84□□□□□ -0.35
LINC00648-204ENST00000557749 ARNTL2Q8WYA1 636 aa12.84□□□□□ -0.35
LINC00648-204ENST00000557749 KIF3AQ9Y496 699 aa12.84□□□□□ -0.35
LINC00648-204ENST00000557749 PSMD10O75832 226 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 MYOGP15173 224 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 DNM2P50570 870 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 ERVK-21P61565 698 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 ME3Q16798 604 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 PTPROQ16827 1216 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 INF2Q27J81 1249 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 XKR3Q5GH77 459 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 METTL13Q8N6R0 699 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 ATXN2LQ8WWM7 1075 aaKnown RBP12.83□□□□□ -0.36
LINC00648-204ENST00000557749 C1orf112Q9NSG2 853 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 THEGQ9P2T0 379 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 KCNJ14Q9UNX9 436 aa12.83□□□□□ -0.36
LINC00648-204ENST00000557749 LINC01553A4QN01 128 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 CHMP2AO43633 222 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 CCNT1O60563 726 aaKnown RBP12.82□□□□□ -0.36
LINC00648-204ENST00000557749 RPS6KA5O75582 802 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 TDP2O95551 362 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 C22orf31O95567 290 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 CRYBB1P53674 252 aaPredicted RBP12.82□□□□□ -0.36
LINC00648-204ENST00000557749 PRKCEQ02156 737 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 TBC1D8BQ0IIM8 1120 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 PPP2R5CQ13362 524 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 ORC2Q13416 577 aaPredicted RBP12.82□□□□□ -0.36
LINC00648-204ENST00000557749 NPY5RQ15761 445 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00648-204ENST00000557749 PIK3AP1Q6ZUJ8 805 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 NSUN7Q8NE18 718 aaKnown RBP12.82□□□□□ -0.36
LINC00648-204ENST00000557749 ETNPPLQ8TBG4 499 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 RSPH1Q8WYR4 309 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 SLC6A16Q9GZN6 736 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 COG5Q9UP83 839 aa12.82□□□□□ -0.36
LINC00648-204ENST00000557749 COL6A3P12111 3177 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 RNF223E7ERA6 249 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 MMP1P03956 469 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 RB1P06400 928 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 MMP16P51512 607 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 PSMC5P62195 406 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 RABEP1Q15276 862 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 FAM117BQ6P1L5 589 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 NPAS4Q8IUM7 802 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 KIAA0319LQ8IZA0 1049 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 FIBCD1Q8N539 461 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 NEK9Q8TD19 979 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 TRAPPC12Q8WVT3 735 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 AIFM3Q96NN9 605 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 UNC45AQ9H3U1 944 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 KCNMB3Q9NPA1 279 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 LRFN2Q9ULH4 789 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 PADI3Q9ULW8 664 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 AKT3Q9Y243 479 aa12.81□□□□□ -0.36
LINC00648-204ENST00000557749 CDH23Q9H251 3354 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.8□□□□□ -0.36
LINC00648-204ENST00000557749 DENND3A2RUS2 1198 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 ENPP3O14638 875 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 GAS2O43903 313 aaKnown RBP12.8□□□□□ -0.36
LINC00648-204ENST00000557749 UPP2O95045 317 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 CTDNEP1O95476 244 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 CD52P31358 61 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 QARSP47897 775 aaKnown RBP12.8□□□□□ -0.36
LINC00648-204ENST00000557749 MCM2P49736 904 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 RBM25P49756 843 aaKnown RBP12.8□□□□□ -0.36
LINC00648-204ENST00000557749 ADGRE1Q14246 886 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 TIGD5Q53EQ6 642 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 B3GNT9Q6UX72 402 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 OTUD6AQ7L8S5 288 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 NECAB1Q8N987 351 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 FAM184AQ8NB25 1140 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms