RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 GIMAP8Q8ND71 665 aaPredicted RBP7.1□□□□□ -1.27
GPHN-215ENST00000557654 CHST13Q8NET6 341 aa7.1□□□□□ -1.27
GPHN-215ENST00000557654 WWC2-AS2Q96NR7 200 aa7.1□□□□□ -1.27
GPHN-215ENST00000557654 CD248Q9HCU0 757 aa7.1□□□□□ -1.27
GPHN-215ENST00000557654 EMC7Q9NPA0 242 aa7.1□□□□□ -1.27
GPHN-215ENST00000557654 SAE1Q9UBE0 346 aaPredicted RBP7.1□□□□□ -1.27
GPHN-215ENST00000557654 DNAI1Q9UI46 699 aa7.1□□□□□ -1.27
GPHN-215ENST00000557654 MSRAQ9UJ68 235 aa7.1□□□□□ -1.27
GPHN-215ENST00000557654 CDC14BO60729 498 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 CD40P25942 277 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 NFYCQ13952 458 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 DGKDQ16760 1214 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 ZBTB41Q5SVQ8 909 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 ZNF585AQ6P3V2 769 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 ZZZ3Q8IYH5 903 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 DNERQ8NFT8 737 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 SLKQ9H2G2 1235 aaPredicted RBP7.09□□□□□ -1.27
GPHN-215ENST00000557654 MTG2Q9H4K7 406 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 KCMF1Q9P0J7 381 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 DENND2AQ9ULE3 1009 aa7.09□□□□□ -1.27
GPHN-215ENST00000557654 PATE3B3GLJ2 98 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 NEMP1O14524 444 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 ADRB1P08588 477 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 CR2P20023 1033 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 MASP1P48740 699 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 HGFACQ04756 655 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 STRN3Q13033 797 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 LRRC32Q14392 662 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 TERF2Q15554 542 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 KIAA1841Q6NSI8 718 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 TIGD7Q6NT04 549 aaPredicted RBP7.08□□□□□ -1.28
GPHN-215ENST00000557654 FUKQ8N0W3 1084 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 Q8TCH9 128 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 RPGRQ92834 1020 aaKnown RBP7.08□□□□□ -1.28
GPHN-215ENST00000557654 DYDC2Q96IM9 177 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 KRTAP9-3Q9BYQ3 159 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 KRTAP4-9Q9BYQ8 210 aa7.08□□□□□ -1.28
GPHN-215ENST00000557654 PUF60Q9UHX1 559 aaKnown RBP7.08□□□□□ -1.28
GPHN-215ENST00000557654 ZFR2Q9UPR6 939 aaKnown RBP7.08□□□□□ -1.28
GPHN-215ENST00000557654 C2orf78A6NCI8 922 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 PCDH8O95206 1070 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 HNRNPLP14866 589 aaKnown RBP eCLIP7.07□□□□□ -1.289e-7■■□□□ 13.7
GPHN-215ENST00000557654 ZNF20P17024 532 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 BPIP17213 487 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 ATP2C1P98194 919 aaPredicted RBP7.07□□□□□ -1.28
GPHN-215ENST00000557654 DUSP8Q13202 625 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 TAF7LQ5H9L4 462 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 BROXQ5VW32 411 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 KLHDC10Q6PID8 442 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 TTC9BQ8N6N2 239 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 USP7Q93009 1102 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 NKD2Q969F2 451 aaPredicted RBP7.07□□□□□ -1.28
GPHN-215ENST00000557654 OR14A2Q96R54 314 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 PLA2G12BQ9BX93 195 aa7.07□□□□□ -1.28
GPHN-215ENST00000557654 PITHD1Q9GZP4 211 aaPredicted RBP7.07□□□□□ -1.28
GPHN-215ENST00000557654 POLR3BQ9NW08 1133 aaPredicted RBP7.07□□□□□ -1.28
GPHN-215ENST00000557654 CTDP1Q9Y5B0 961 aaPredicted RBP7.07□□□□□ -1.28
GPHN-215ENST00000557654 RBM8AQ9Y5S9 174 aaKnown RBP7.07□□□□□ -1.28
GPHN-215ENST00000557654 OPHN1O60890 802 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 ZNF623O75123 536 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 BCAR1P56945 870 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 OCRLQ01968 901 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 SAFB2Q14151 953 aaKnown RBP eCLIP7.06□□□□□ -1.28
GPHN-215ENST00000557654 DDB1Q16531 1140 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 ATP13A4Q4VNC1 1196 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 DDX46Q7L014 1031 aaKnown RBP7.06□□□□□ -1.28
GPHN-215ENST00000557654 C11orf74Q86VG3 221 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 PALM2Q8IXS6 379 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 GPR135Q8IZ08 494 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 ZNF610Q8N9Z0 462 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 SLC5A5Q92911 643 aa7.06□□□□□ -1.28
GPHN-215ENST00000557654 AGO3Q9H9G7 860 aaKnown RBP7.06□□□□□ -1.28
GPHN-215ENST00000557654 A0A0A6YYJ9 748 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 A0A0A6YYK5 440 aaPredicted RBP7.05□□□□□ -1.28
GPHN-215ENST00000557654 CLEC2LP0C7M8 214 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 LSP1P33241 339 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 PHC1P78364 1004 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 DHCR24Q15392 516 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 CDSNQ15517 529 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 ESPNLQ6ZVH7 1005 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 BMP8AQ7Z5Y6 402 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 WDR92Q96MX6 357 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 NOL10Q9BSC4 688 aaKnown RBP7.05□□□□□ -1.28
GPHN-215ENST00000557654 SOX7Q9BT81 388 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 ANO3Q9BYT9 981 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 HAPLN2Q9GZV7 340 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 DEF6Q9H4E7 631 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 CAAP1Q9H8G2 361 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 VWA7Q9Y334 891 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 PPP2R3BQ9Y5P8 575 aa7.05□□□□□ -1.28
GPHN-215ENST00000557654 MYPNQ86TC9 1320 aa7.04□□□□□ -1.28
GPHN-215ENST00000557654 KDM1AO60341 852 aa7.04□□□□□ -1.28
GPHN-215ENST00000557654 H2AFYO75367 372 aaKnown RBP7.04□□□□□ -1.28
GPHN-215ENST00000557654 GPR158Q5T848 1215 aa7.04□□□□□ -1.28
GPHN-215ENST00000557654 EGFLAMQ63HQ2 1017 aa7.04□□□□□ -1.28
GPHN-215ENST00000557654 CXorf67Q86X51 503 aaPredicted RBP7.04□□□□□ -1.28
GPHN-215ENST00000557654 CHAC2Q8WUX2 184 aa7.04□□□□□ -1.28
GPHN-215ENST00000557654 FERMT2Q96AC1 680 aa7.04□□□□□ -1.28
GPHN-215ENST00000557654 TMEM176AQ96HP8 235 aa7.04□□□□□ -1.28
GPHN-215ENST00000557654 RPL10LQ96L21 214 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms