RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 NBNO60934 754 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 CXCL10P02778 98 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 RFC5P40937 340 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 TECP42680 631 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 POLGP54098 1239 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-223ENST00000557511 CYP4A11Q02928 519 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 KCNC4Q03721 635 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 PAK2Q13177 524 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 MARCH8Q5T0T0 291 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 DTHD1Q6ZMT9 781 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 TSHZ1Q6ZSZ6 1077 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 C16orf59Q7L2K0 433 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 C4orf19Q8IY42 314 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 DBF4BQ8NFT6 615 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 WNT8BQ93098 351 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 DYDC2Q96IM9 177 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 EIF2AK1Q9BQI3 630 aaKnown RBP9.31□□□□□ -0.92
PSEN1-223ENST00000557511 LXNQ9BS40 222 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 NIFKQ9BYG3 293 aaKnown RBP9.31□□□□□ -0.92
PSEN1-223ENST00000557511 IFIH1Q9BYX4 1025 aaKnown RBP9.31□□□□□ -0.92
PSEN1-223ENST00000557511 CELF4Q9BZC1 486 aaKnown RBP9.31□□□□□ -0.92
PSEN1-223ENST00000557511 SQORQ9Y6N5 450 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 LTBP2Q14767 1821 aa9.31□□□□□ -0.92
PSEN1-223ENST00000557511 TMEM265A0A087WTH1 108 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 EML1O00423 815 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 GPR182O15218 404 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 GAS2O43903 313 aaKnown RBP9.3□□□□□ -0.92
PSEN1-223ENST00000557511 ZNF862O60290 1169 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 C22orf31O95567 290 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 GHRP10912 638 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 ATP4AP20648 1035 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 YWHABP31946 246 aaKnown RBP9.3□□□□□ -0.92
PSEN1-223ENST00000557511 CRYBB1P53674 252 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-223ENST00000557511 TMEM62Q0P6H9 643 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 NFX1Q12986 1120 aaKnown RBP9.3□□□□□ -0.92
PSEN1-223ENST00000557511 CTTNQ14247 550 aaKnown RBP9.3□□□□□ -0.92
PSEN1-223ENST00000557511 BECN1Q14457 450 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 UGCGQ16739 394 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 PLEKHG4Q58EX7 1191 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 XKR9Q5GH70 373 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 KRT79Q5XKE5 535 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 B3GNT9Q6UX72 402 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 TCP11Q8WWU5 503 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 MTMR9Q96QG7 549 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 NACC1Q96RE7 527 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 FTHL17Q9BXU8 183 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 INO80BQ9C086 356 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-223ENST00000557511 SLC28A3Q9HAS3 691 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 TUFT1Q9NNX1 390 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 CYP26B1Q9NR63 512 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 RGL1Q9NZL6 768 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 LRWD1Q9UFC0 647 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 DOCK5Q9H7D0 1870 aa9.3□□□□□ -0.92
PSEN1-223ENST00000557511 TLL1O43897 1013 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 RPS6KA5O75582 802 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 CHRNA1P02708 482 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 XRCC6P12956 609 aaKnown RBP eCLIP9.29□□□□□ -0.92
PSEN1-223ENST00000557511 MUTP22033 750 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 CLCN1P35523 988 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 CCT6AP40227 531 aaKnown RBP9.29□□□□□ -0.92
PSEN1-223ENST00000557511 PRPHP41219 470 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 CLCN3P51790 818 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 WDR5P61964 334 aaKnown RBP9.29□□□□□ -0.92
PSEN1-223ENST00000557511 PDIA5Q14554 519 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 FBXO47Q5MNV8 452 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 RASIP1Q5U651 963 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 FAM109BQ6ICB4 259 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-223ENST00000557511 TRAF7Q6Q0C0 670 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 KIAA0319LQ8IZA0 1049 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 MYOCDQ8IZQ8 938 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 LRRC71Q8N4P6 559 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 DEFB123Q8N688 67 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 RASSF8Q8NHQ8 419 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 TIFAQ96CG3 184 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 ZBTB10Q96DT7 871 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 CDK5RAP3Q96JB5 506 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 GCOM2Q9BZD3 368 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-223ENST00000557511 TMEM60Q9H2L4 133 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 ZSCAN16Q9H4T2 348 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-223ENST00000557511 ANKEF1Q9NU02 776 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 CXXC1Q9P0U4 656 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-223ENST00000557511 SUCLA2Q9P2R7 463 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-223ENST00000557511 LRFN2Q9ULH4 789 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 PCDHB6Q9Y5E3 794 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 PCDHB3Q9Y5E6 796 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 PCDHA11Q9Y5I1 949 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 KDM3AQ9Y4C1 1321 aa9.29□□□□□ -0.92
PSEN1-223ENST00000557511 DENND3A2RUS2 1198 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 ARHGEF35A5YM69 484 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 SOX1O00570 391 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-223ENST00000557511 ASAP2O43150 1006 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 STX6O43752 255 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 MAFO75444 373 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-223ENST00000557511 SLITRK3O94933 977 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 LYPLA2O95372 231 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 VTNP04004 478 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 STAG3L1P0CL83 205 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 ZSCAN20P17040 1043 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-223ENST00000557511 SYT1P21579 422 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 NLRP11P59045 1033 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms