RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 OSBPL7Q9BZF2 842 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 JADE2Q9NQC1 790 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 TUBE1Q9UJT0 475 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 C5orf42Q9H799 3197 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 NLRC5Q86WI3 1866 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 FAM86C2PA6NEL3 165 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 CCDC69A6NI79 296 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 SPDYE3A6NKU9 549 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 TTLL8A6PVC2 850 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 H3BQ06 376 aaPredicted RBP9.91□□□□□ -0.82
VRK1-206ENST00000557222 ATP9AO75110 1047 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 DGKIO75912 1065 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 MMP1P03956 469 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 STAG3L1P0CL83 205 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 GHRP10912 638 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 ITGB5P18084 799 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 ADD1P35611 737 aaKnown RBP9.91□□□□□ -0.82
VRK1-206ENST00000557222 LTBRP36941 435 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 SLC26A2P50443 739 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 MRPS6P82932 125 aaKnown RBP9.91□□□□□ -0.82
VRK1-206ENST00000557222 RELBQ01201 579 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 MTMR1Q13613 665 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 SMAD2Q15796 467 aaKnown RBP9.91□□□□□ -0.82
VRK1-206ENST00000557222 MARCH8Q5T0T0 291 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 RUFY4Q6ZNE9 571 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 PLPPR4Q7Z2D5 763 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 CMTR2Q8IYT2 770 aaKnown RBP9.91□□□□□ -0.82
VRK1-206ENST00000557222 SRBD1Q8N5C6 995 aaKnown RBP9.91□□□□□ -0.82
VRK1-206ENST00000557222 GLG1Q92896 1179 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 IRF7Q92985 503 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 AZI2Q9H6S1 392 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 CLDND1Q9NY35 253 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 CDY2AQ9Y6F7 541 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 TAF6LQ9Y6J9 622 aa9.91□□□□□ -0.82
VRK1-206ENST00000557222 NFASCO94856 1347 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 KDM3AQ9Y4C1 1321 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 FSD2A1L4K1 749 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 SH2B2O14492 632 aaPredicted RBP9.9□□□□□ -0.82
VRK1-206ENST00000557222 GRM6O15303 877 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 PRC1O43663 620 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 FOSP01100 380 aaPredicted RBP9.9□□□□□ -0.82
VRK1-206ENST00000557222 SP4Q02446 784 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 HYAL1Q12794 435 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 ADAM15Q13444 863 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 SMAD4Q13485 552 aaKnown RBP9.9□□□□□ -0.82
VRK1-206ENST00000557222 BTG3Q14201 252 aaPredicted RBP9.9□□□□□ -0.82
VRK1-206ENST00000557222 NFXL1Q6ZNB6 911 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 NPAS4Q8IUM7 802 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 DNAJB3Q8WWF6 145 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 PIBF1Q8WXW3 757 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 GLT8D2Q9H1C3 349 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 JPH1Q9HDC5 661 aaPredicted RBP9.9□□□□□ -0.82
VRK1-206ENST00000557222 PCDHA6Q9UN73 950 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 PLAGL2Q9UPG8 496 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 TELO2Q9Y4R8 837 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 PCDHA8Q9Y5H6 950 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 PCDHA2Q9Y5H9 948 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 RBM8AQ9Y5S9 174 aaKnown RBP9.9□□□□□ -0.82
VRK1-206ENST00000557222 WDFY4Q6ZS81 3184 aa9.9□□□□□ -0.82
VRK1-206ENST00000557222 DOCK5Q9H7D0 1870 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 ZNF318Q5VUA4 2279 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 SMIM35A0A1B0GVV1 85 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 hCG_1984214I3L0E3 225 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 M0QZ92 97 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 MBTPS2O43462 519 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 ATG7O95352 703 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 PLEKHA8P1O95397 391 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 EYA4O95677 639 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 INSRRP14616 1297 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 PKN1Q16512 942 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 HERC4Q5GLZ8 1057 aaPredicted RBP9.89□□□□□ -0.83
VRK1-206ENST00000557222 ODR4Q5SWX8 454 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 EP400NLQ6ZTU2 488 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 SGMS1Q86VZ5 419 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 ZNF713Q8N859 430 aaPredicted RBP9.89□□□□□ -0.83
VRK1-206ENST00000557222 FANCBQ8NB91 859 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 MFSD14AQ96MC6 490 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 PCYT2Q99447 389 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 MXRA8Q9BRK3 442 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 SDF4Q9BRK5 362 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 KCNH7Q9NS40 1196 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 SLC9A2Q9UBY0 812 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 CD207Q9UJ71 328 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 TRPV2Q9Y5S1 764 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 SLC12A7Q9Y666 1083 aa9.89□□□□□ -0.83
VRK1-206ENST00000557222 IGSF9BQ9UPX0 1349 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 FIGNL2A6NMB9 653 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 ADH1AP07327 375 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 MARK3P27448 753 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 CD52P31358 61 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 IRS1P35568 1242 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 GMPRP36959 345 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 STAT5BP51692 787 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 UBE3AQ05086 875 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 CAMK1Q14012 370 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.88□□□□□ -0.833e-7■□□□□ 10.2
VRK1-206ENST00000557222 SYNE3Q6ZMZ3 975 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 TMTC3Q6ZXV5 915 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 NIPA1Q7RTP0 329 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 BMP8AQ7Z5Y6 402 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms