RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 AFDNP55196 1824 aaKnown RBP5.14□□□□□ -1.59
ATXN3-241ENST00000556374 CCDC85CA6NKD9 419 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 SCAMP3O14828 347 aaKnown RBP5.14□□□□□ -1.59
ATXN3-241ENST00000556374 AURKAO14965 403 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 MAP4K4O95819 1239 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-241ENST00000556374 CCDC192P0DO97 292 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 SDHBP21912 280 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 KCNC1P48547 511 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 LBX1P52954 281 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 AK2P54819 239 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 G3BP1Q13283 466 aaKnown RBP eCLIP5.14□□□□□ -1.59
ATXN3-241ENST00000556374 KRT32Q14532 448 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 KIR3DS1Q14943 382 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 VPS53Q5VIR6 699 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 C9orf131Q5VYM1 1079 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 DCAF15Q66K64 600 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 CWC27Q6UX04 472 aaKnown RBP5.14□□□□□ -1.59
ATXN3-241ENST00000556374 LSRQ86X29 649 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-241ENST00000556374 CHMP4CQ96CF2 233 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 FSD1Q9BTV5 496 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 TM6SF1Q9BZW5 370 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 HMG20BQ9P0W2 317 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 CHPF2Q9P2E5 772 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 ZNF451Q9Y4E5 1061 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 SNX14Q9Y5W7 946 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 RFX7Q2KHR2 1363 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 CEMIPQ8WUJ3 1361 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 SIPA1L3O60292 1781 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-241ENST00000556374 DLEC1Q9Y238 1755 aa5.14□□□□□ -1.59
ATXN3-241ENST00000556374 ITGB4P16144 1822 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 CBFA2T2O43439 604 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 PPM1BO75688 479 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 GLI4P10075 376 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 HSPA8P11142 646 aaKnown RBP5.13□□□□□ -1.59
ATXN3-241ENST00000556374 HSP90B1P14625 803 aaKnown RBP5.13□□□□□ -1.59
ATXN3-241ENST00000556374 GJB2P29033 226 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 GIPRP48546 466 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 ZNF143P52747 638 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-241ENST00000556374 CASP7P55210 303 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 BLOC1S2Q6QNY1 142 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 SAPCD2Q86UD0 394 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 AACSQ86V21 672 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 CCDC83Q8IWF9 413 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 TP53I13Q8NBR0 393 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-241ENST00000556374 IP6K1Q92551 441 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 PEX11GQ96HA9 241 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 HAUS7Q99871 368 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 LSG1Q9H089 658 aaKnown RBP5.13□□□□□ -1.59
ATXN3-241ENST00000556374 USP44Q9H0E7 712 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 NUP62CLQ9H1M0 184 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 HYPKQ9NX55 129 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 CNPY2Q9Y2B0 182 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 ZDHHC9Q9Y397 364 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 CCDC171Q6TFL3 1326 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 ADAMTS20P59510 1910 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 DICER1Q9UPY3 1922 aaKnown RBP5.13□□□□□ -1.59
ATXN3-241ENST00000556374 MRC1P22897 1456 aa5.13□□□□□ -1.59
ATXN3-241ENST00000556374 RGPD2P0DJD1 1756 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 PI4KAP2A4QPH2 592 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 FFAR3O14843 346 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 IL2RBP14784 551 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 EIF4A1P60842 406 aaKnown RBP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 RACK1P63244 317 aaKnown RBP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 FOXO4P98177 505 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 ZNF200P98182 395 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 MTX1Q13505 466 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 SPATS1Q496A3 300 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 VWA3BQ502W6 1294 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 BEND3Q5T5X7 828 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 TMCO4Q5TGY1 634 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 TDRD10Q5VZ19 366 aaKnown RBP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 BICRALQ6AI39 1079 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 RUFY3Q7L099 469 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 ARHGEF39Q8N4T4 335 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 CRACR2BQ8N4Y2 399 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 PI4KAP1Q8N8J0 262 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 IL17REQ8NFR9 667 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 BICD2Q8TD16 824 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 PIBF1Q8WXW3 757 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 TTC14Q96N46 770 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 SCAND2PQ9GZW5 306 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 KLHL25Q9H0H3 589 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 NOL6Q9H6R4 1146 aaKnown RBP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 DDX19AQ9NUU7 478 aaKnown RBP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 RNF181Q9P0P0 153 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 USP25Q9UHP3 1055 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 MAP3K2Q9Y2U5 619 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 RBM8AQ9Y5S9 174 aaKnown RBP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 KDM6AO15550 1401 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-241ENST00000556374 ADAMTS7Q9UKP4 1686 aa5.12□□□□□ -1.59
ATXN3-241ENST00000556374 ARFGEF2Q9Y6D5 1785 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 GOLGA6L19H0YKK7 550 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 H3BQV1 296 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 GRM8O00222 908 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 RNMTO43148 476 aaKnown RBP5.11□□□□□ -1.59
ATXN3-241ENST00000556374 ADCY5O95622 1261 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 ADRB1P08588 477 aa5.11□□□□□ -1.59
ATXN3-241ENST00000556374 NAT2P11245 290 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms