RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 METTL13Q8N6R0 699 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 DEPTORQ8TB45 409 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 FAM200AQ8TCP9 573 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 SPIRE2Q8WWL2 714 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 BPIFA3Q9BQP9 254 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 SH2D3AQ9BRG2 576 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 FUCA2Q9BTY2 467 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 UNC93B1Q9H1C4 597 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 C2orf40Q9H1Z8 148 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 SLC39A2Q9NP94 309 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 PRDM10Q9NQV6 1147 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 PDLIM7Q9NR12 457 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 SUCLA2Q9P2R7 463 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-218ENST00000556343 EXOC7Q9UPT5 735 aa10.18□□□□□ -0.78
ACTN1-218ENST00000556343 UBE4BO95155 1302 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 LRRC37A2A6NM11 1700 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 TMEM150BA6NC51 233 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 SFI1A8K8P3 1242 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 HAS3O00219 553 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 GCNT3O95395 438 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 SMIM10L2AP0DMW4 78 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 SMIM10L2BP0DMW5 78 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 ARL2P36404 184 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 CACNB1Q02641 598 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-218ENST00000556343 STK4Q13043 487 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 PAK1Q13153 545 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 HSP90AA2PQ14568 343 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-218ENST00000556343 GSE1Q14687 1217 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 LHX8Q68G74 356 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 NFRKBQ6P4R8 1299 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 MTHFD1LQ6UB35 978 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 CXCL17Q6UXB2 119 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 ZNF720Q7Z2F6 126 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 RSPH3Q86UC2 560 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 SFR1Q86XK3 245 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 ZBTB8OSQ8IWT0 167 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 NME8Q8N427 588 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 KAT2BQ92831 832 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 TMEM143Q96AN5 459 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 HVCN1Q96D96 273 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 NTPCRQ9BSD7 190 aaKnown RBP10.17□□□□□ -0.78
ACTN1-218ENST00000556343 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 POLR3FQ9H1D9 316 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-218ENST00000556343 DNAJC25Q9H1X3 360 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 TMEM206Q9H813 350 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 KMT5AQ9NQR1 393 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 TBC1D7Q9P0N9 293 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 PCDHA2Q9Y5H9 948 aa10.17□□□□□ -0.78
ACTN1-218ENST00000556343 IGKV6-21A0A0C4DH24 114 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 MYADML2A6NDP7 307 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 RSPH10B2B2RC85 870 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 K7ENM7 598 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 DNM1LO00429 736 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 EIF3DO15371 548 aaKnown RBP eCLIP10.16□□□□□ -0.78
ACTN1-218ENST00000556343 CALUO43852 315 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-218ENST00000556343 C22orf31O95567 290 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 TFRCP02786 760 aaKnown RBP10.16□□□□□ -0.78
ACTN1-218ENST00000556343 RSPH10BP0C881 870 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 PTGS1P23219 599 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 PRCPP42785 496 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 NAMPTP43490 491 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 EFNA5P52803 228 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 ACLYP53396 1101 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 PEX3P56589 373 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 SNRPFP62306 86 aaKnown RBP10.16□□□□□ -0.78
ACTN1-218ENST00000556343 POU5F1BQ06416 359 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 EHHADHQ08426 723 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 STRN3Q13033 797 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 UVSSAQ2YD98 709 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 NBPF20Q3BBV1 942 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 DPCR1Q3MIW9 517 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 FAM47CQ5HY64 1035 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 KLHL10Q6JEL2 608 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 TAF2Q6P1X5 1199 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 HS2ST1Q7LGA3 356 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 SYCP3Q8IZU3 236 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 ADSSL1Q8N142 457 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 GOLGA5Q8TBA6 731 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 ENOX1Q8TC92 643 aaKnown RBP10.16□□□□□ -0.78
ACTN1-218ENST00000556343 NOC3LQ8WTT2 800 aaKnown RBP10.16□□□□□ -0.78
ACTN1-218ENST00000556343 ANP32BQ92688 251 aaKnown RBP10.16□□□□□ -0.78
ACTN1-218ENST00000556343 ARMC5Q96C12 935 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 DEFB118Q96PH6 123 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 ACCSQ96QU6 501 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 CEP89Q96ST8 783 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 ST6GALNAC4Q9H4F1 302 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 PAK6Q9NQU5 681 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-218ENST00000556343 SETD4Q9NVD3 440 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 CGNQ9P2M7 1197 aaKnown RBP10.16□□□□□ -0.78
ACTN1-218ENST00000556343 RWDD2AQ9UIY3 292 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 AKT3Q9Y243 479 aa10.16□□□□□ -0.78
ACTN1-218ENST00000556343 A0A0U1RQG5 324 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-218ENST00000556343 SMIM35A0A1B0GVV1 85 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 LRRIQ4A6NIV6 560 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 ZBTB42B2RXF5 422 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 PPP1R3GB7ZBB8 358 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 M0QZ92 97 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 IKBKBO14920 756 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 GJB1P08034 283 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 SRGAP2CP0DJJ0 459 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms