RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 MTF1Q14872 753 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 PLA2G4FQ68DD2 849 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 KCNV1Q6PIU1 500 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 CYFIP1Q7L576 1253 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 SLC9A9Q8IVB4 645 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 CCDC60Q8IWA6 550 aaPredicted RBP16.16■□□□□ 0.18
VPS33B-205ENST00000556096 PARK7Q99497 189 aaKnown RBP16.16■□□□□ 0.18
VPS33B-205ENST00000556096 C17orf75Q9HAS0 396 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 WBP1LQ9NX94 342 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 CGNQ9P2M7 1197 aaKnown RBP16.16■□□□□ 0.18
VPS33B-205ENST00000556096 WDR81Q562E7 1941 aa16.16■□□□□ 0.18
VPS33B-205ENST00000556096 SYNGAP1Q96PV0 1343 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 IGKV6D-21A0A0A0MT36 114 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 K7ENM7 598 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 CLIC2O15247 247 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 HNRNPH3P31942 346 aaKnown RBP16.15■□□□□ 0.18
VPS33B-205ENST00000556096 NCKAP1LP55160 1127 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 SNRPFP62306 86 aaKnown RBP16.15■□□□□ 0.18
VPS33B-205ENST00000556096 GTF2BQ00403 316 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 CDK17Q00537 523 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 XKR3Q5GH77 459 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 WDR59Q6PJI9 974 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 MAEAQ7L5Y9 396 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 MORC4Q8TE76 937 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 KIFAP3Q92845 792 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 CEP170P1Q96L14 293 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 FGD4Q96M96 766 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 ACCSQ96QU6 501 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 BEGAINQ9BUH8 593 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 MMRN2Q9H8L6 949 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 AGPAT3Q9NRZ7 376 aa16.15■□□□□ 0.18
VPS33B-205ENST00000556096 ZNHIT6Q9NWK9 470 aaKnown RBP16.15■□□□□ 0.18
VPS33B-205ENST00000556096 MAFBQ9Y5Q3 323 aaPredicted RBP16.15■□□□□ 0.18
VPS33B-205ENST00000556096 DGAT1O75907 488 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 UBA1P22314 1058 aaKnown RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 PSMC2P35998 433 aaKnown RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 GCLCP48506 637 aaPredicted RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 CCNA1P78396 465 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 PRKCEQ02156 737 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 KCNH2Q12809 1159 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 ANKRD13CQ8N6S4 541 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 GPRC5AQ8NFJ5 357 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 NEK11Q8NG66 645 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 KIF18AQ8NI77 898 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 BORCS6Q96GS4 357 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 TELO2Q9Y4R8 837 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 CA12O43570 354 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 FARP2O94887 1054 aaPredicted RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 AFPP02771 609 aaKnown RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 PGK2P07205 417 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 HSPA1AP0DMV8 641 aaKnown RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 HSPA1BP0DMV9 641 aaKnown RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 XRCC5P13010 732 aaKnown RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 RTP1P59025 263 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 ETF1P62495 437 aaKnown RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 SP4Q02446 784 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 FAM102BQ5T8I3 360 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 TRIM65Q6PJ69 517 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 HAUS6Q7Z4H7 955 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 KSR1Q8IVT5 923 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 C12orf56Q8IXR9 622 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 SYCP3Q8IZU3 236 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 MCPH1Q8NEM0 835 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 MYRIPQ8NFW9 859 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 SPIRE2Q8WWL2 714 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 HVCN1Q96D96 273 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 CHP1Q99653 195 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 SH2D3AQ9BRG2 576 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 NTPCRQ9BSD7 190 aaKnown RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 ZFYVE28Q9HCC9 887 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 ZNF302Q9NR11 478 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 FAM207AQ9NSI2 230 aaPredicted RBP16.14■□□□□ 0.17
VPS33B-205ENST00000556096 PLAGL2Q9UPG8 496 aa16.14■□□□□ 0.17
VPS33B-205ENST00000556096 PLXNA1Q9UIW2 1896 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 LRRC37A2A6NM11 1700 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 DOCK5Q9H7D0 1870 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 CASP4P49662 377 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 SMTNP53814 917 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 PEX3P56589 373 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 DESI2Q9BSY9 194 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 PORCNQ9H237 461 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 GPRC5CQ9NQ84 441 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 CYP26B1Q9NR63 512 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 MORF4L1Q9UBU8 362 aa16.13■□□□□ 0.17
VPS33B-205ENST00000556096 EPN1Q9Y6I3 576 aaPredicted RBP16.13■□□□□ 0.17
VPS33B-205ENST00000556096 ADGRA2Q96PE1 1338 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 GSTTP1A0A1W2PQM5 241 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 EPHB6O15197 1021 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 ALDH1A1P00352 501 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 METTL7BQ6UX53 244 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 FAM186BQ8IYM0 893 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 CCDC170Q8IYT3 715 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 CCDC155Q8N6L0 562 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 BAP1Q92560 729 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 NIFKQ9BYG3 293 aaKnown RBP16.12■□□□□ 0.17
VPS33B-205ENST00000556096 NUCKS1Q9H1E3 243 aaKnown RBP16.12■□□□□ 0.17
VPS33B-205ENST00000556096 ZCCHC17Q9NP64 241 aaKnown RBP16.12■□□□□ 0.17
VPS33B-205ENST00000556096 CEP72Q9P209 647 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms