RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 CRAMP1Q96RY5 1269 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 GLIS2Q9BZE0 524 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-233ENST00000555816 NYXQ9GZU5 481 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 SAGE1Q9NXZ1 904 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 STRIP2Q9ULQ0 834 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 AKT3Q9Y243 479 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 EMC9Q9Y3B6 208 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 MRC1P22897 1456 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 SCN4AP35499 1836 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 KIF20BQ96Q89 1820 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 TIAM2Q8IVF5 1701 aa6.45□□□□□ -1.38
ATXN3-233ENST00000555816 PPIP5K2O43314 1243 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 RPL13P26373 211 aaKnown RBP6.44□□□□□ -1.38
ATXN3-233ENST00000555816 PIP4K2AP48426 406 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-233ENST00000555816 HUNKP57058 714 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 CXCL9Q07325 125 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 HLFQ16534 295 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 FAM26FQ5R3K3 315 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 ZC3H18Q86VM9 953 aaKnown RBP6.44□□□□□ -1.38
ATXN3-233ENST00000555816 ZNF513Q8N8E2 541 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-233ENST00000555816 KYQ8NBH2 561 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 BVESQ8NE79 360 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 SUPT20HQ8NEM7 779 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 SHDQ96IW2 340 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 SAMD11Q96NU1 681 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 NOX5Q96PH1 765 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 RBM15Q96T37 977 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATXN3-233ENST00000555816 TGIF2Q9GZN2 237 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 ZNF408Q9H9D4 720 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 CYP26B1Q9NR63 512 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 PCDHB10Q9UN67 800 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 KIF7Q2M1P5 1343 aa6.44□□□□□ -1.38
ATXN3-233ENST00000555816 AFDNP55196 1824 aaKnown RBP6.43□□□□□ -1.38
ATXN3-233ENST00000555816 FER1L6Q2WGJ9 1857 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 PRAMEF22A3QJZ6 481 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 ERVV-1B6SEH8 477 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 H7C1D1 291 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 NOP56O00567 594 aaKnown RBP6.43□□□□□ -1.38
ATXN3-233ENST00000555816 TCERG1O14776 1098 aaKnown RBP6.43□□□□□ -1.38
ATXN3-233ENST00000555816 FUCA1P04066 466 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 NTRK1P04629 796 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 INSRRP14616 1297 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 CNR2P34972 360 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 SLC6A11P48066 632 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 GMPSP49915 693 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-233ENST00000555816 KIF23Q02241 960 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-233ENST00000555816 NCAPHQ15003 741 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 TNIP1Q15025 636 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 PPP2R5EQ16537 467 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 KIAA1211LQ6NV74 962 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 RGMBQ6NW40 437 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 BORAQ6PGQ7 559 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 VHLLQ6RSH7 139 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 ETV3LQ6ZN32 361 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 MIB1Q86YT6 1006 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 RIOX2Q8IUF8 465 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 LGI4Q8N135 537 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 C2orf69Q8N8R5 385 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 ADAMTS17Q8TE56 1095 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 SEC14L1Q92503 715 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 GCC1Q96CN9 775 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 C11orf84Q9BUA3 381 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-233ENST00000555816 TMPRSS5Q9H3S3 457 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 RXFP1Q9HBX9 757 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 RNF186Q9NXI6 227 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 FBLN5Q9UBX5 448 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 ATP6V0A2Q9Y487 856 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 DUSP10Q9Y6W6 482 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 DLEC1Q9Y238 1755 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 VIRMAQ69YN4 1812 aaKnown RBP6.43□□□□□ -1.38
ATXN3-233ENST00000555816 SLX4Q8IY92 1834 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 NPC1L1Q9UHC9 1359 aa6.43□□□□□ -1.38
ATXN3-233ENST00000555816 ADAMTSL1Q8N6G6 1762 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 U2SURPO15042 1029 aaKnown RBP6.42□□□□□ -1.38
ATXN3-233ENST00000555816 BBOX1O75936 387 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 GTF2A2P52657 109 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 PKN2Q16513 984 aaKnown RBP6.42□□□□□ -1.38
ATXN3-233ENST00000555816 MROH9Q5TGP6 573 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 E4F1Q66K89 784 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-233ENST00000555816 CTU1Q7Z7A3 348 aaKnown RBP6.42□□□□□ -1.38
ATXN3-233ENST00000555816 CPLX3Q8WVH0 158 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 DDX1Q92499 740 aaKnown RBP6.42□□□□□ -1.38
ATXN3-233ENST00000555816 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 RTFDC1Q9BY42 306 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-233ENST00000555816 ACBD3Q9H3P7 528 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 GBA2Q9HCG7 927 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-233ENST00000555816 SMPD4Q9NXE4 827 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 CNOT7Q9UIV1 285 aaKnown RBP6.42□□□□□ -1.38
ATXN3-233ENST00000555816 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-233ENST00000555816 CDHR2Q9BYE9 1310 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 CEMIPQ8WUJ3 1361 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 SNED1Q8TER0 1413 aa6.42□□□□□ -1.38
ATXN3-233ENST00000555816 DICER1Q9UPY3 1922 aaKnown RBP6.41□□□□□ -1.38
ATXN3-233ENST00000555816 C1QTNF3-AMACRE9PGA6 284 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 PLATP00750 562 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 HSPA5P11021 654 aaKnown RBP6.41□□□□□ -1.38
ATXN3-233ENST00000555816 PLS3P13797 630 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 THBS2P35442 1172 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 SURF1Q15526 300 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 NAALADL2Q58DX5 795 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms