RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 ZC3H7AQ8IWR0 971 aaKnown RBP5.78□□□□□ -1.48
SCFD1-216ENST00000555550 CISD2Q8N5K1 135 aaKnown RBP5.78□□□□□ -1.48
SCFD1-216ENST00000555550 OSBPL2Q9H1P3 480 aa5.78□□□□□ -1.48
SCFD1-216ENST00000555550 WDR26Q9H7D7 661 aa5.78□□□□□ -1.48
SCFD1-216ENST00000555550 CRTAMO95727 393 aa5.77□□□□□ -1.49
SCFD1-216ENST00000555550 NUDT3O95989 172 aa5.77□□□□□ -1.49
SCFD1-216ENST00000555550 C6orf222P0C671 652 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-216ENST00000555550 ADRA1BP35368 520 aa5.77□□□□□ -1.49
SCFD1-216ENST00000555550 MAN2A2P49641 1150 aa5.77□□□□□ -1.49
SCFD1-216ENST00000555550 LACTBP83111 547 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-216ENST00000555550 CCDC142Q17RM4 750 aa5.77□□□□□ -1.49
SCFD1-216ENST00000555550 GAREM2Q75VX8 874 aa5.77□□□□□ -1.49
SCFD1-216ENST00000555550 HAS1Q92839 578 aa5.77□□□□□ -1.49
SCFD1-216ENST00000555550 ERCC4Q92889 916 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-216ENST00000555550 GPHA2Q96T91 129 aa5.77□□□□□ -1.49
SCFD1-216ENST00000555550 GPR87Q9BY21 358 aa5.77□□□□□ -1.49
SCFD1-216ENST00000555550 RBM8AQ9Y5S9 174 aaKnown RBP5.77□□□□□ -1.49
SCFD1-216ENST00000555550 C2orf78A6NCI8 922 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 GOLGA8BA8MQT2 603 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 GOLGA6L22H0YM25 854 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 FOXP2O15409 715 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 BMS1Q14692 1282 aaKnown RBP5.76□□□□□ -1.49
SCFD1-216ENST00000555550 ELAVL1Q15717 326 aaKnown RBP5.76□□□□□ -1.49
SCFD1-216ENST00000555550 NFE2L2Q16236 605 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 FAM47CQ5HY64 1035 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 FAM111BQ6SJ93 734 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 ZNF662Q6ZS27 426 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 NOSTRINQ8IVI9 506 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 ANKRD53Q8N9V6 530 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 ZSWIM2Q8NEG5 633 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 THAP3Q8WTV1 239 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-216ENST00000555550 PGBD4Q96DM1 585 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 SLC6A15Q9H2J7 730 aa5.76□□□□□ -1.49
SCFD1-216ENST00000555550 EFCAB14O75071 495 aa5.75□□□□□ -1.49
SCFD1-216ENST00000555550 APEX1P27695 318 aaKnown RBP5.75□□□□□ -1.49
SCFD1-216ENST00000555550 PTGS2P35354 604 aa5.75□□□□□ -1.49
SCFD1-216ENST00000555550 TMEM132BQ14DG7 1078 aa5.75□□□□□ -1.49
SCFD1-216ENST00000555550 KCNH7Q9NS40 1196 aa5.75□□□□□ -1.49
SCFD1-216ENST00000555550 SFMBT1Q9UHJ3 866 aa5.75□□□□□ -1.49
SCFD1-216ENST00000555550 UBE2QL1A1L167 161 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 ANTXR2P58335 489 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 BPIFB4P59827 614 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 KLHDC10Q6PID8 442 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 ELOA2Q8IYF1 753 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-216ENST00000555550 CALML6Q8TD86 181 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 SLC25A43Q8WUT9 341 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-216ENST00000555550 GCDHQ92947 438 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-216ENST00000555550 NAF1Q96HR8 494 aaKnown RBP5.74□□□□□ -1.49
SCFD1-216ENST00000555550 MRFAP1L1Q96HT8 127 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 MAGEB10Q96LZ2 347 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-216ENST00000555550 DRC1Q96MC2 740 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 MLST8Q9BVC4 326 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 SLC52A2Q9HAB3 445 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 CDK11AQ9UQ88 783 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-216ENST00000555550 COQ6Q9Y2Z9 468 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 VWA7Q9Y334 891 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 ASB1Q9Y576 335 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 PTCH2Q9Y6C5 1203 aa5.74□□□□□ -1.49
SCFD1-216ENST00000555550 CCDC163A0A0D9SF12 145 aa5.73□□□□□ -1.49
SCFD1-216ENST00000555550 H2AFYO75367 372 aaKnown RBP5.73□□□□□ -1.49
SCFD1-216ENST00000555550 CSRP2Q16527 193 aa5.73□□□□□ -1.49
SCFD1-216ENST00000555550 C2orf27AQ580R0 203 aa5.73□□□□□ -1.49
SCFD1-216ENST00000555550 RABL3Q5HYI8 236 aa5.73□□□□□ -1.49
SCFD1-216ENST00000555550 NPM2Q86SE8 214 aaKnown RBP5.73□□□□□ -1.49
SCFD1-216ENST00000555550 ZNF276Q8N554 614 aa5.73□□□□□ -1.49
SCFD1-216ENST00000555550 SLC7A6OSQ96CW6 309 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-216ENST00000555550 RIOX1Q9H6W3 641 aa5.73□□□□□ -1.49
SCFD1-216ENST00000555550 ZSWIM4Q9H7M6 989 aa5.73□□□□□ -1.49
SCFD1-216ENST00000555550 SAE1Q9UBE0 346 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-216ENST00000555550 ZNHIT2Q9UHR6 403 aa5.73□□□□□ -1.49
SCFD1-216ENST00000555550 DENND2AQ9ULE3 1009 aa5.73□□□□□ -1.49
SCFD1-216ENST00000555550 TRAF5O00463 557 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 RASGRP1O95267 797 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 RABGGTBP53611 331 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 ADAM8P78325 824 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 MRPS21P82921 87 aaKnown RBP5.72□□□□□ -1.49
SCFD1-216ENST00000555550 MAP3K12Q12852 859 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 CATSPEREQ5SY80 951 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 LILRB2Q8N423 598 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 ATXN2LQ8WWM7 1075 aaKnown RBP5.72□□□□□ -1.49
SCFD1-216ENST00000555550 DLG3Q92796 817 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 LPPQ93052 612 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 MNTQ99583 582 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 TCF25Q9BQ70 676 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 TRPS1Q9UHF7 1281 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 B3GALT1Q9Y5Z6 326 aa5.72□□□□□ -1.49
SCFD1-216ENST00000555550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-216ENST00000555550 KLRG2A4D1S0 409 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-216ENST00000555550 LMNAP02545 664 aaKnown RBP5.71□□□□□ -1.5
SCFD1-216ENST00000555550 NR4A1P22736 598 aa5.71□□□□□ -1.5
SCFD1-216ENST00000555550 TCIRG1Q13488 830 aa5.71□□□□□ -1.5
SCFD1-216ENST00000555550 FKBP15Q5T1M5 1219 aa5.71□□□□□ -1.5
SCFD1-216ENST00000555550 MB21D1Q8N884 522 aa5.71□□□□□ -1.5
SCFD1-216ENST00000555550 SLC7A14Q8TBB6 771 aa5.71□□□□□ -1.5
SCFD1-216ENST00000555550 NTN5Q8WTR8 489 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-216ENST00000555550 UBXN4Q92575 508 aa5.71□□□□□ -1.5
SCFD1-216ENST00000555550 MRPL4Q9BYD3 311 aaKnown RBP5.71□□□□□ -1.5
SCFD1-216ENST00000555550 PACSIN3Q9UKS6 424 aa5.71□□□□□ -1.5
SCFD1-216ENST00000555550 MASP2O00187 686 aa5.7□□□□□ -1.5
SCFD1-216ENST00000555550 SESN2P58004 480 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms