RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	PMF1-BGLAP	U3KQ54	211 aa		5.73	□□□□□ -1.49
KTN1-222	ENST00000555506	UBA6	A0AVT1	1052 aa	Predicted RBP	5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	GOLGA6L22	H0YM25	854 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	SUV39H1	O43463	412 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	CAND2	O75155	1236 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	C8B	P07358	591 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	AOAH	P28039	575 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	DBP	Q10586	325 aa	Predicted RBP	5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	ERICH6B	Q5W0A0	696 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	PRRT2	Q7Z6L0	340 aa	Predicted RBP	5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	MIB1	Q86YT6	1006 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	CMTR2	Q8IYT2	770 aa	Known RBP	5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	FAM26E	Q8N5C1	309 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	MARCH10	Q8NA82	808 aa	Predicted RBP	5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	HIPK4	Q8NE63	616 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	HSPBAP1	Q96EW2	488 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	KCNC2	Q96PR1	638 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	NUP88	Q99567	741 aa	Predicted RBP	5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	SEMA4A	Q9H3S1	761 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	POFUT1	Q9H488	388 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	ZCCHC4	Q9H5U6	513 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	DTL	Q9NZJ0	730 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	HSPBP1	Q9NZL4	362 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	INVS	Q9Y283	1065 aa		5.72	□□□□□ -1.49
KTN1-222	ENST00000555506	VCAM1	P19320	739 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	CYP2C19	P33261	490 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	MANF	P55145	182 aa	Known RBP	5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	CAP1	Q01518	475 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	DLX2	Q07687	328 aa	Predicted RBP	5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	TCIRG1	Q13488	830 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	ACAP2	Q15057	778 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	TTC38	Q5R3I4	469 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	EFCAB2	Q5VUJ9	269 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	TIGD7	Q6NT04	549 aa	Predicted RBP	5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	ETV3L	Q6ZN32	361 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	ADGRG2	Q8IZP9	1017 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	LINC01356	Q8N9X3	169 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	SSH1	Q8WYL5	1049 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	DDX11	Q96FC9	970 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	TOE1	Q96GM8	510 aa	Known RBP	5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	ANO3	Q9BYT9	981 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	WNT8A	Q9H1J5	351 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	BTBD7	Q9P203	1132 aa		5.71	□□□□□ -1.49
KTN1-222	ENST00000555506	ADAMTS20	P59510	1910 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506		A0A1B0GTL3	188 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	MTNR1B	P49286	362 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	SRSF2	Q01130	221 aa	Known RBP	5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	GTF2H3	Q13889	308 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	UGT8	Q16880	541 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	CT83	Q5H943	113 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	CD276	Q5ZPR3	534 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	FAM126B	Q8IXS8	530 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	ZNF526	Q8TF50	670 aa	Predicted RBP	5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	JADE3	Q92613	823 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	MAML3	Q96JK9	1138 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	TEKT5	Q96M29	485 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	TUBGCP5	Q96RT8	1024 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	FOXB1	Q99853	325 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	PPP2R3B	Q9Y5P8	575 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	GPR45	Q9Y5Y3	372 aa		5.71	□□□□□ -1.5
KTN1-222	ENST00000555506	PRAMEF22	A3QJZ6	481 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	ELL2	O00472	640 aa	Predicted RBP	5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	PRPF6	O94906	941 aa	Known RBP	5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	IL33	O95760	270 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	PRL	P01236	227 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	LRG1	P02750	347 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	KRT18	P05783	430 aa	Known RBP	5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	CLEC2L	P0C7M8	214 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	MTHFD2	P13995	350 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	AGXT	P21549	392 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	STAT5A	P42229	794 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	MRPS9	P82933	396 aa	Known RBP	5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	ROM1	Q03395	351 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	MYBPC3	Q14896	1274 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	NFIX	Q14938	502 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	MAP9	Q49MG5	647 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	MINDY4	Q4G0A6	757 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	PITRM1	Q5JRX3	1037 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	ZBTB41	Q5SVQ8	909 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	PRAMEF18	Q5VWM3	479 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	CCDC62	Q6P9F0	684 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	KCNK18	Q7Z418	384 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	SAPCD2	Q86UD0	394 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	FERMT2	Q96AC1	680 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	EAF2	Q96CJ1	260 aa	Predicted RBP	5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	RAX2	Q96IS3	184 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	AIFM3	Q96NN9	605 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	GORASP1	Q9BQQ3	440 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	MYL10	Q9BUA6	226 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	QRSL1	Q9H0R6	528 aa	Known RBP	5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	WDR26	Q9H7D7	661 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	ARHGAP28	Q9P2N2	729 aa		5.7	□□□□□ -1.5
KTN1-222	ENST00000555506	PRSS38	A1L453	326 aa		5.69	□□□□□ -1.5
KTN1-222	ENST00000555506	VSTM5	A8MXK1	200 aa		5.69	□□□□□ -1.5
KTN1-222	ENST00000555506	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
KTN1-222	ENST00000555506	APOL3	O95236	402 aa		5.69	□□□□□ -1.5
KTN1-222	ENST00000555506	CYP2C8	P10632	490 aa		5.69	□□□□□ -1.5
KTN1-222	ENST00000555506	MC4R	P32245	332 aa		5.69	□□□□□ -1.5

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