RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 KCNJ6P48051 423 aa15.83■□□□□ 0.12
SHMT2-217ENST00000555116 CEBPZQ03701 1054 aaKnown RBP15.83■□□□□ 0.12
SHMT2-217ENST00000555116 HYIQ5T013 277 aa15.83■□□□□ 0.12
SHMT2-217ENST00000555116 AK8Q96MA6 479 aa15.83■□□□□ 0.12
SHMT2-217ENST00000555116 MTRQ99707 1265 aa15.83■□□□□ 0.12
SHMT2-217ENST00000555116 DDX19AQ9NUU7 478 aaKnown RBP15.83■□□□□ 0.12
SHMT2-217ENST00000555116 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 MARCKSP29966 332 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 LONP1P36776 959 aaKnown RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 NASPP49321 788 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 CDC42EP1Q00587 391 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 PAK2Q13177 524 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 SLC39A14Q15043 492 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 FAM228AQ86W67 206 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 RHPN2Q8IUC4 686 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 KSR1Q8IVT5 923 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 TCP11Q8WWU5 503 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 CCDC43Q96MW1 224 aaKnown RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 PNMA5Q96PV4 448 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 TMX1Q9H3N1 280 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 ATP6V0A4Q9HBG4 840 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 FBXO2Q9UK22 296 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 ZDHHC9Q9Y397 364 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 LAMA2P24043 3122 aaKnown RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 RPS6KA5O75582 802 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 BRD1O95696 1058 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 DARSP14868 501 aaKnown RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 PBX2P40425 430 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 GRB10Q13322 594 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 GPR153Q6NV75 609 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 KCNK18Q7Z418 384 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 RTN4RL1Q86UN2 441 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 ZNF410Q86VK4 478 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 PRPF31Q8WWY3 499 aaKnown RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 PSPC1Q8WXF1 523 aaKnown RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 LINC01599Q8WXQ3 324 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 ZNF396Q96N95 335 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 PBX4Q9BYU1 374 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 CIZ1Q9ULV3 898 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-217ENST00000555116 ST3GAL5Q9UNP4 418 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 COL4A3BPQ9Y5P4 624 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 MYH11P35749 1972 aa15.82■□□□□ 0.12
SHMT2-217ENST00000555116 A0A087WZ62 844 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 ARHGEF35A5YM69 484 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 SLC26A4O43511 780 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 USO1O60763 962 aaKnown RBP15.81■□□□□ 0.12
SHMT2-217ENST00000555116 EIF4BP23588 611 aaKnown RBP15.81■□□□□ 0.12
SHMT2-217ENST00000555116 ARL2P36404 184 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 RABGGTBP53611 331 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 LAMTOR4Q0VGL1 99 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 TMEM119Q4V9L6 283 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 PADI6Q6TGC4 694 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 TMCO2Q7Z6W1 182 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-217ENST00000555116 CABP7Q86V35 215 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 HERC6Q8IVU3 1022 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 NLRP7Q8WX94 980 aa15.81■□□□□ 0.12
SHMT2-217ENST00000555116 FDXACB1Q9BRP7 624 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-217ENST00000555116 TFIP11Q9UBB9 837 aaKnown RBP15.81■□□□□ 0.12
SHMT2-217ENST00000555116 SRPRBQ9Y5M8 271 aaKnown RBP15.81■□□□□ 0.12
SHMT2-217ENST00000555116 E9PMD0 336 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 ENPP3O14638 875 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 EYA4O95677 639 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 NFX1Q12986 1120 aaKnown RBP15.8■□□□□ 0.12
SHMT2-217ENST00000555116 LINC00301Q8NCQ3 95 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 SCLT1Q96NL6 688 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 FTHL17Q9BXU8 183 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 CSRNP2Q9H175 543 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 BHMT2Q9H2M3 363 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 IFT122Q9HBG6 1241 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 DNM3Q9UQ16 869 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 YBX2Q9Y2T7 364 aaKnown RBP15.8■□□□□ 0.12
SHMT2-217ENST00000555116 GPR182O15218 404 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 ASAP2O43150 1006 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 AMHP03971 560 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 CYP11B2P19099 503 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 DNAJB2P25686 324 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
SHMT2-217ENST00000555116 RAB30Q15771 203 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 ODR4Q5SWX8 454 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 FAM43BQ6ZT52 329 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-217ENST00000555116 ASAP3Q8TDY4 903 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 NLRP4Q96MN2 994 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 GCOM2Q9BZD3 368 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-217ENST00000555116 TSPYL2Q9H2G4 693 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-217ENST00000555116 PCDHA11Q9Y5I1 949 aa15.8■□□□□ 0.12
SHMT2-217ENST00000555116 MGEA5O60502 916 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 MYOGP15173 224 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 UBA7P41226 1012 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 DSC3Q14574 896 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 STK38Q15208 465 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 FOXD4L6Q3SYB3 417 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-217ENST00000555116 FOXD4L3Q6VB84 417 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-217ENST00000555116 USP49Q70CQ1 688 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 MYOCDQ8IZQ8 938 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 KCTD17Q8N5Z5 321 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 MCPH1Q8NEM0 835 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 CLIC6Q96NY7 704 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 PLIN2Q99541 437 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 NT5C3AQ9H0P0 336 aa15.79■□□□□ 0.12
SHMT2-217ENST00000555116 POLR3FQ9H1D9 316 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms