RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CYP26B1Q9NR63 512 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 SAMM50Q9Y512 469 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 PHLPP2Q6ZVD8 1323 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 ZBTB42B2RXF5 422 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 CETN3O15182 167 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 MAPK13O15264 365 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 CHRM1P11229 460 aaPredicted RBP9.78□□□□□ -0.84
TDP1-210ENST00000554976 ZSCAN20P17040 1043 aaPredicted RBP9.78□□□□□ -0.84
TDP1-210ENST00000554976 C1orf220Q5T0J3 134 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 SLC39A4Q6P5W5 647 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 HVCN1Q96D96 273 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 DRC1Q96MC2 740 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 DESI2Q9BSY9 194 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 DHX33Q9H6R0 707 aaKnown RBP9.78□□□□□ -0.84
TDP1-210ENST00000554976 PLAGL2Q9UPG8 496 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 R3HCC1Q9Y3T6 440 aaKnown RBP9.78□□□□□ -0.84
TDP1-210ENST00000554976 GTPBP10A4D1E9 387 aaKnown RBP9.78□□□□□ -0.84
TDP1-210ENST00000554976 CCP110O43303 1012 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 IGHA2P01877 340 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 TUBB4AP04350 444 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 SNRPFP62306 86 aaKnown RBP9.78□□□□□ -0.84
TDP1-210ENST00000554976 KCNH2Q12809 1159 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 FKBP15Q5T1M5 1219 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 TMEM63BQ5T3F8 832 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 PDXDC1Q6P996 788 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 MAP4K3Q8IVH8 894 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 ABRAQ8N0Z2 381 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 C17orf75Q9HAS0 396 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 PLCB1Q9NQ66 1216 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 CGNQ9P2M7 1197 aaKnown RBP9.78□□□□□ -0.84
TDP1-210ENST00000554976 FBXL5Q9UKA1 691 aa9.78□□□□□ -0.84
TDP1-210ENST00000554976 CLIC2O15247 247 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 CTIFO43310 598 aaKnown RBP9.77□□□□□ -0.84
TDP1-210ENST00000554976 TLR2O60603 784 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 ABL1P00519 1130 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 PPP2R3AQ06190 1150 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 PTPN14Q15678 1187 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 XKR9Q5GH70 373 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 TAF3Q5VWG9 929 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 TAPT1Q6NXT6 567 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 SEPT14Q6ZU15 432 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 ZNF467Q7Z7K2 595 aaPredicted RBP9.77□□□□□ -0.84
TDP1-210ENST00000554976 SMCR8Q8TEV9 937 aaPredicted RBP9.77□□□□□ -0.84
TDP1-210ENST00000554976 GPR20Q99678 358 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 L2HGDHQ9H9P8 463 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 EFCC1Q9HA90 598 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 CEP72Q9P209 647 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 AJAP1Q9UKB5 411 aaPredicted RBP9.77□□□□□ -0.84
TDP1-210ENST00000554976 PNMA3Q9UL41 463 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 USP20Q9Y2K6 914 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 LUC7L2Q9Y383 392 aaKnown RBP9.77□□□□□ -0.84
TDP1-210ENST00000554976 PCDHB13Q9Y5F0 798 aa9.77□□□□□ -0.84
TDP1-210ENST00000554976 EMSYQ7Z589 1322 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 TISP43B9A030 160 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 K7ENM7 598 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 ZNF263O14978 683 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 DKC1O60832 514 aaKnown RBP eCLIP9.77□□□□□ -0.85
TDP1-210ENST00000554976 OATP04181 439 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 ADSSP30520 456 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 ARL2P36404 184 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 NPTX2P47972 431 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 JAM2P57087 298 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 APBA1Q02410 837 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 MAPK8IP2Q13387 824 aaPredicted RBP9.77□□□□□ -0.85
TDP1-210ENST00000554976 LY6KQ17RY6 165 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 CCDC40Q4G0X9 1142 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 XKR3Q5GH77 459 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 CELF3Q5SZQ8 465 aaKnown RBP9.77□□□□□ -0.85
TDP1-210ENST00000554976 METTL7BQ6UX53 244 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 ACRBPQ8NEB7 543 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 LMO3Q8TAP4 145 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 PLEKHO2Q8TD55 490 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 SYN2Q92777 582 aaPredicted RBP9.77□□□□□ -0.85
TDP1-210ENST00000554976 ZNF302Q9NR11 478 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 ARHGAP20Q9P2F6 1191 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 ARHGAP28Q9P2N2 729 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 NENFQ9UMX5 172 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 PASKQ96RG2 1323 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 CCL15-CCL14A0A0B4J2E2 113 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 ZSCAN12O43309 604 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 DGAT1O75907 488 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 SOX10P56693 466 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 CCL15Q16663 113 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 HAUS6Q7Z4H7 955 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 CREBRFQ8IUR6 639 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 SLC17A8Q8NDX2 589 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 ZSWIM2Q8NEG5 633 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 KIFAP3Q92845 792 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 GBP3Q9H0R5 595 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 TMEM206Q9H813 350 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 METTL14Q9HCE5 456 aaKnown RBP9.77□□□□□ -0.85
TDP1-210ENST00000554976 LARSQ9P2J5 1176 aaKnown RBP9.77□□□□□ -0.85
TDP1-210ENST00000554976 DIS3Q9Y2L1 958 aaKnown RBP9.77□□□□□ -0.85
TDP1-210ENST00000554976 PAXBP1Q9Y5B6 917 aa9.77□□□□□ -0.85
TDP1-210ENST00000554976 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.77□□□□□ -0.85
TDP1-210ENST00000554976 LRRC53A6NM62 1247 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 RBAK-RBAKDNI3L0D1 243 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 KIF2AO00139 706 aaPredicted RBP9.76□□□□□ -0.85
TDP1-210ENST00000554976 RIOK3O14730 519 aaKnown RBP9.76□□□□□ -0.85
TDP1-210ENST00000554976 NDUFA10O95299 355 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms