RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MKRN4PQ13434 485 aaPredicted RBP18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 BFSP2Q13515 415 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 RUFY4Q6ZNE9 571 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 LRRC71Q8N4P6 559 aa18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 SUCLA2Q9P2R7 463 aaPredicted RBP18.23■□□□□ 0.51
SPTLC2-203ENST00000554901 DNAH12Q6ZR08 3092 aa18.22■□□□□ 0.51
SPTLC2-203ENST00000554901 CLTBP09497 229 aa18.22■□□□□ 0.51
SPTLC2-203ENST00000554901 ZNF131P52739 623 aa18.22■□□□□ 0.51
SPTLC2-203ENST00000554901 GIT2Q14161 759 aa18.22■□□□□ 0.51
SPTLC2-203ENST00000554901 PPP2R5AQ15172 486 aa18.22■□□□□ 0.51
SPTLC2-203ENST00000554901 TRIM71Q2Q1W2 868 aaKnown RBP18.22■□□□□ 0.51
SPTLC2-203ENST00000554901 FAM102BQ5T8I3 360 aa18.22■□□□□ 0.51
SPTLC2-203ENST00000554901 DNAJB3Q8WWF6 145 aa18.22■□□□□ 0.51
SPTLC2-203ENST00000554901 DNAJC19Q96DA6 116 aa18.22■□□□□ 0.51
SPTLC2-203ENST00000554901 REEP2Q9BRK0 252 aa18.22■□□□□ 0.51
SPTLC2-203ENST00000554901 GTPBP6O43824 516 aaPredicted RBP18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 HIP1RO75146 1068 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 TBCAO75347 108 aaKnown RBP18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 SCP2P22307 547 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 POU5F1BQ06416 359 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 MAPK7Q13164 816 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 ZNF410Q86VK4 478 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 DAW1Q8N136 415 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 PRPF31Q8WWY3 499 aaKnown RBP18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 DHX38Q92620 1227 aaKnown RBP18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 TMEM143Q96AN5 459 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 ZBTB10Q96DT7 871 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 IFT74Q96LB3 600 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 FAM49AQ9H0Q0 323 aaPredicted RBP18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 POLR3FQ9H1D9 316 aaPredicted RBP18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 LARSQ9P2J5 1176 aaKnown RBP18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 SEL1LQ9UBV2 794 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 TBX21Q9UL17 535 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 AKT3Q9Y243 479 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 COL4A3BPQ9Y5P4 624 aa18.21■□□□□ 0.51
SPTLC2-203ENST00000554901 TRIP12Q14669 1992 aaPredicted RBP18.21■□□□□ 0.5
SPTLC2-203ENST00000554901 PVALEFA0A1B0GWK0 134 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 FRMD3A2A2Y4 597 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 M0QZ92 97 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 GAP43P17677 238 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 AFMP43652 599 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 DRP2Q13474 957 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 TFDP1Q14186 410 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 POSTNQ15063 836 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 FAM26DQ5JW98 314 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 DYMQ7RTS9 669 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 GPT2Q8TD30 523 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 STAMQ92783 540 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 PARVGQ9HBI0 331 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 TMEM39AQ9NV64 488 aa18.2■□□□□ 0.5
SPTLC2-203ENST00000554901 KIAA0355O15063 1070 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 FAM13AO94988 1023 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 PARNO95453 639 aaKnown RBP18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 PLS3P13797 630 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 THPOP40225 353 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 NAMPTP43490 491 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 MRPS6P82932 125 aaKnown RBP18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 MDM2Q00987 491 aaPredicted RBP18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 LAMTOR4Q0VGL1 99 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 MAEAQ7L5Y9 396 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 RHPN2Q8IUC4 686 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 CCDC65Q8IXS2 484 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 SLC17A8Q8NDX2 589 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 SPIRE2Q8WWL2 714 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 WNT8BQ93098 351 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 NTPCRQ9BSD7 190 aaKnown RBP18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 NOC4LQ9BVI4 516 aaKnown RBP18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 NFKBIZQ9BYH8 718 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 GPRC5CQ9NQ84 441 aa18.19■□□□□ 0.5
SPTLC2-203ENST00000554901 NPHP3-ACAD11A0A0J9YXS1 232 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 VTNP04004 478 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 CKBP12277 381 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 GLRA2P23416 452 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 ABCD1P33897 745 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 GPC3P51654 580 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 ASIC1P78348 528 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 RAD51AP2Q09MP3 1159 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 DMP1Q13316 513 aaPredicted RBP18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 CUL4BQ13620 913 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 SKOR2Q2VWA4 1001 aaPredicted RBP18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 FAM43BQ6ZT52 329 aaPredicted RBP18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 UNC13DQ70J99 1090 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 KCNN1Q92952 543 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 HIPK3Q9H422 1215 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 SQORQ9Y6N5 450 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 EVPLQ92817 2033 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 PHLPP2Q6ZVD8 1323 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 H0YCG3 227 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 GPR32O75388 356 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 MAPTP10636 758 aaKnown RBP18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 SELPP16109 830 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 CRYBB1P53674 252 aaPredicted RBP18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 SMTNP53814 917 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 NLRP11P59045 1033 aaKnown RBP18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 DPYDQ12882 1025 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 IFNLR1Q8IU57 520 aaPredicted RBP18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 GRAMD1CQ8IYS0 662 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 ASAP3Q8TDY4 903 aa18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 CCDC47Q96A33 483 aaKnown RBP18.18■□□□□ 0.5
SPTLC2-203ENST00000554901 CELF4Q9BZC1 486 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms