RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 PGM5Q15124 567 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 E4F1Q66K89 784 aaPredicted RBP18.02■□□□□ 0.48
PCNX1-209ENST00000554879 FAM76AQ8TAV0 307 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 NRBP2Q9NSY0 501 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 AGPAT5Q9NUQ2 364 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 ITGB5P18084 799 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 TMEM119Q4V9L6 283 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 WNK4Q96J92 1243 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 ACCSQ96QU6 501 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 PANX2Q96RD6 677 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 POLR3CQ9BUI4 534 aaPredicted RBP18.02■□□□□ 0.48
PCNX1-209ENST00000554879 GPRC5CQ9NQ84 441 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 DOCK2Q92608 1830 aa18.02■□□□□ 0.48
PCNX1-209ENST00000554879 SLITRK3O94933 977 aa18.02■□□□□ 0.47
PCNX1-209ENST00000554879 ZBED6P86452 979 aa18.02■□□□□ 0.47
PCNX1-209ENST00000554879 GIT2Q14161 759 aa18.02■□□□□ 0.47
PCNX1-209ENST00000554879 ODF2Q5BJF6 829 aa18.02■□□□□ 0.47
PCNX1-209ENST00000554879 ETNPPLQ8TBG4 499 aa18.02■□□□□ 0.47
PCNX1-209ENST00000554879 MMP19Q99542 508 aa18.02■□□□□ 0.47
PCNX1-209ENST00000554879 CHP1Q99653 195 aa18.02■□□□□ 0.47
PCNX1-209ENST00000554879 PPP2R3BQ9Y5P8 575 aa18.02■□□□□ 0.47
PCNX1-209ENST00000554879 CDKAL1Q5VV42 579 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 FASTKD5Q7L8L6 764 aaKnown RBP18.01■□□□□ 0.47
PCNX1-209ENST00000554879 EHBP1Q8NDI1 1231 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 SPATA20Q8TB22 786 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 GYPCP04921 128 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 HIRAP54198 1017 aaPredicted RBP18.01■□□□□ 0.47
PCNX1-209ENST00000554879 PRPF4BQ13523 1007 aaKnown RBP18.01■□□□□ 0.47
PCNX1-209ENST00000554879 FAM133AQ8N9E0 248 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 TEPSINQ96N21 525 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 A1CFQ9NQ94 594 aaKnown RBP18.01■□□□□ 0.47
PCNX1-209ENST00000554879 PNMA3Q9UL41 463 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 TRIM49P0CI25 452 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 TRIM49CP0CI26 452 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 KRT5P13647 590 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 SFNP31947 248 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 PTGER2P43116 358 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 IWS1Q96ST2 819 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 GCNT4Q9P109 453 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 PPP1R12AO14974 1030 aaPredicted RBP18.01■□□□□ 0.47
PCNX1-209ENST00000554879 SKAP2O75563 359 aaPredicted RBP18.01■□□□□ 0.47
PCNX1-209ENST00000554879 SRGAP2CP0DJJ0 459 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 TMEM132BQ14DG7 1078 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 ZNF513Q8N8E2 541 aaPredicted RBP18.01■□□□□ 0.47
PCNX1-209ENST00000554879 NEK9Q8TD19 979 aa18.01■□□□□ 0.47
PCNX1-209ENST00000554879 CTAGE15A4D2H0 777 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 PIK3CDO00329 1044 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 LRRN2O75325 713 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 CTAGE8P0CG41 777 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 MICALCLQ6ZW33 695 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 CTAGE6Q86UF2 777 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 CTAGE4Q8IX94 777 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 RSRC1Q96IZ7 334 aaKnown RBP18■□□□□ 0.47
PCNX1-209ENST00000554879 CABS1Q96KC9 395 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 IRX2Q9BZI1 471 aaPredicted RBP18■□□□□ 0.47
PCNX1-209ENST00000554879 TYW1Q9NV66 732 aaKnown RBP18■□□□□ 0.47
PCNX1-209ENST00000554879 COL20A1Q9P218 1284 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 A0A1B0GUL6 1792 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 PHF20L1A8MW92 1017 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 NOVP48745 357 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 FAM160B1Q5W0V3 765 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 KIFC3Q9BVG8 833 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 GGPS1O95749 300 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 PAX7P23759 505 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 RNASE9P60153 205 aaKnown RBP18■□□□□ 0.47
PCNX1-209ENST00000554879 RBBP5Q15291 538 aaKnown RBP18■□□□□ 0.47
PCNX1-209ENST00000554879 TREML2Q5T2D2 321 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 PPM1KQ8N3J5 372 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 INTS13Q9NVM9 706 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 MRFAP1Q9Y605 127 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 ZNF831Q5JPB2 1677 aa18■□□□□ 0.47
PCNX1-209ENST00000554879 CELF2O95319 508 aaKnown RBP17.99■□□□□ 0.47
PCNX1-209ENST00000554879 EIF4A3P38919 411 aaKnown RBP17.99■□□□□ 0.47
PCNX1-209ENST00000554879 SNAPC2Q13487 334 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 DUSP9Q99956 384 aaKnown RBP17.99■□□□□ 0.47
PCNX1-209ENST00000554879 ZNF302Q9NR11 478 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 CYP3A7-CYP3A51PA0A087WV96 503 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 DENND3A2RUS2 1198 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 ENO4A6NNW6 628 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 ENC1O14682 589 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 NDUFA10O95299 355 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 CYP3A7P24462 503 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 CIITAP33076 1130 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 PAFAH1B1P43034 410 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 PCNX4Q63HM2 1172 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 HAUS6Q7Z4H7 955 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 CEP112Q8N8E3 955 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 NHEJ1Q9H9Q4 299 aaPredicted RBP17.99■□□□□ 0.47
PCNX1-209ENST00000554879 FAM184BQ9ULE4 1060 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.99■□□□□ 0.47
PCNX1-209ENST00000554879 CCL15-CCL14A0A0B4J2E2 113 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 BUB1O43683 1085 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 CCL15Q16663 113 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 SCFD1Q8WVM8 642 aa17.99■□□□□ 0.47
PCNX1-209ENST00000554879 AGO4Q9HCK5 861 aaKnown RBP17.99■□□□□ 0.47
PCNX1-209ENST00000554879 G3BP2Q9UN86 482 aaKnown RBP17.99■□□□□ 0.47
PCNX1-209ENST00000554879 USP2O75604 605 aaPredicted RBP17.99■□□□□ 0.47
PCNX1-209ENST00000554879 HNRNPH1P31943 449 aaKnown RBP17.99■□□□□ 0.47
PCNX1-209ENST00000554879 CATSPERGQ6ZRH7 1159 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms