RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 SMAD2Q15796 467 aaKnown RBP14.39□□□□□ -0.11
XRCC3-206ENST00000554170 TMEM266Q2M3C6 531 aa14.39□□□□□ -0.11
XRCC3-206ENST00000554170 TAF2Q6P1X5 1199 aa14.39□□□□□ -0.11
XRCC3-206ENST00000554170 FIBCD1Q8N539 461 aa14.39□□□□□ -0.11
XRCC3-206ENST00000554170 C11orf84Q9BUA3 381 aaPredicted RBP14.39□□□□□ -0.11
XRCC3-206ENST00000554170 TMEM60Q9H2L4 133 aa14.39□□□□□ -0.11
XRCC3-206ENST00000554170 RWDD3Q9Y3V2 267 aa14.39□□□□□ -0.11
XRCC3-206ENST00000554170 CACNA1HO95180 2353 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 EML1O00423 815 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 RB1P06400 928 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 ATP4AP20648 1035 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 BMPR1AP36894 532 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 QARSP47897 775 aaKnown RBP14.38□□□□□ -0.11
XRCC3-206ENST00000554170 TOB1P50616 345 aaPredicted RBP14.38□□□□□ -0.11
XRCC3-206ENST00000554170 PRKCEQ02156 737 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 BECN1Q14457 450 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 XKR3Q5GH77 459 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 HFE2Q6ZVN8 426 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 POP1Q99575 1024 aaKnown RBP14.38□□□□□ -0.11
XRCC3-206ENST00000554170 LMAN2LQ9H0V9 348 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 RC3H2Q9HBD1 1191 aaKnown RBP14.38□□□□□ -0.11
XRCC3-206ENST00000554170 PCDHB6Q9Y5E3 794 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 ADGRA3Q8IWK6 1321 aa14.38□□□□□ -0.11
XRCC3-206ENST00000554170 MBLAC1A4D2B0 266 aaPredicted RBP14.37□□□□□ -0.11
XRCC3-206ENST00000554170 LAD1O00515 517 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 GRM6O15303 877 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 STX6O43752 255 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 CHRNA1P02708 482 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 KLRC1P26715 233 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 TECP42680 631 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 DLX2Q07687 328 aaPredicted RBP14.37□□□□□ -0.11
XRCC3-206ENST00000554170 HYAL1Q12794 435 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 PTGDRQ13258 359 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 NBR1Q14596 966 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 CLUL1Q15846 466 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 UGCGQ16739 394 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 MARCH8Q5T0T0 291 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 MTHFD1LQ6UB35 978 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 FERMT3Q86UX7 667 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 TRAPPC12Q8WVT3 735 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 CLP1Q92989 425 aaKnown RBP14.37□□□□□ -0.11
XRCC3-206ENST00000554170 RAB34Q9BZG1 259 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.37□□□□□ -0.11
XRCC3-206ENST00000554170 SEPT9Q9UHD8 586 aaPredicted RBP14.37□□□□□ -0.11
XRCC3-206ENST00000554170 PCDHA2Q9Y5H9 948 aa14.37□□□□□ -0.11
XRCC3-206ENST00000554170 SMIM35A0A1B0GVV1 85 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 DDX11L8A8MPP1 907 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 M0QZ92 97 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 MAGEB2O15479 319 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 MBTPS2O43462 519 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 ZNF862O60290 1169 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 GHRP10912 638 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 SPIRE1Q08AE8 756 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 HERC4Q5GLZ8 1057 aaPredicted RBP14.36□□□□□ -0.11
XRCC3-206ENST00000554170 RUFY4Q6ZNE9 571 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 OTUD6AQ7L8S5 288 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 SPRYD3Q8NCJ5 442 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 ERMNQ8TAM6 284 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 DNAJB3Q8WWF6 145 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 DYDC2Q96IM9 177 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 EIF2AK1Q9BQI3 630 aaKnown RBP14.36□□□□□ -0.11
XRCC3-206ENST00000554170 ZSCAN16Q9H4T2 348 aaPredicted RBP14.36□□□□□ -0.11
XRCC3-206ENST00000554170 ZSWIM4Q9H7M6 989 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 MUTYHQ9UIF7 546 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 STK24Q9Y6E0 443 aa14.36□□□□□ -0.11
XRCC3-206ENST00000554170 PLXNA4Q9HCM2 1894 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 TBX10O75333 385 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 BMP15O95972 392 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 TMOD1P28289 359 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 PRPHP41219 470 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 MGAT3Q09327 533 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 SMAD4Q13485 552 aaKnown RBP14.35□□□□□ -0.11
XRCC3-206ENST00000554170 IER5Q5VY09 327 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 DTHD1Q6ZMT9 781 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 TPH2Q8IWU9 490 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 C4orf19Q8IY42 314 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 NME8Q8N427 588 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 C4orf32Q8N8J7 132 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 ZNF689Q96CS4 500 aaPredicted RBP14.35□□□□□ -0.11
XRCC3-206ENST00000554170 MFSD14AQ96MC6 490 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 LXNQ9BS40 222 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 PLVAPQ9BX97 442 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 NIFKQ9BYG3 293 aaKnown RBP14.35□□□□□ -0.11
XRCC3-206ENST00000554170 FAM49AQ9H0Q0 323 aaPredicted RBP14.35□□□□□ -0.11
XRCC3-206ENST00000554170 MTMR6Q9Y217 621 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 WDR81Q562E7 1941 aa14.35□□□□□ -0.11
XRCC3-206ENST00000554170 POTEMA6NI47 508 aa14.34□□□□□ -0.11
XRCC3-206ENST00000554170 ENPP3O14638 875 aa14.34□□□□□ -0.11
XRCC3-206ENST00000554170 SLITRK3O94933 977 aa14.34□□□□□ -0.11
XRCC3-206ENST00000554170 GTF2F1P35269 517 aaKnown RBP eCLIP14.34□□□□□ -0.11
XRCC3-206ENST00000554170 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
XRCC3-206ENST00000554170 CYP4A11Q02928 519 aa14.34□□□□□ -0.11
XRCC3-206ENST00000554170 TBC1D8BQ0IIM8 1120 aa14.34□□□□□ -0.11
XRCC3-206ENST00000554170 BTG3Q14201 252 aaPredicted RBP14.34□□□□□ -0.11
XRCC3-206ENST00000554170 CTTNQ14247 550 aaKnown RBP14.34□□□□□ -0.11
XRCC3-206ENST00000554170 PDIA5Q14554 519 aa14.34□□□□□ -0.11
XRCC3-206ENST00000554170 LPIN1Q14693 890 aa14.34□□□□□ -0.11
XRCC3-206ENST00000554170 MTERF2Q49AM1 385 aa14.34□□□□□ -0.11
XRCC3-206ENST00000554170 RNF135Q8IUD6 432 aa14.34□□□□□ -0.11
XRCC3-206ENST00000554170 EXOC8Q8IYI6 725 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms