RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 GSTA4O15217 222 aa3.82□□□□□ -1.8
SRP54-204ENST00000553923 ZFP36P26651 326 aaKnown RBP3.82□□□□□ -1.8
SRP54-204ENST00000553923 ERCC5P28715 1186 aaPredicted RBP3.82□□□□□ -1.8
SRP54-204ENST00000553923 DNM2P50570 870 aa3.82□□□□□ -1.8
SRP54-204ENST00000553923 SESN2P58004 480 aaPredicted RBP3.82□□□□□ -1.8
SRP54-204ENST00000553923 ALDH6A1Q02252 535 aaKnown RBP3.82□□□□□ -1.8
SRP54-204ENST00000553923 ARID5AQ03989 594 aa3.82□□□□□ -1.8
SRP54-204ENST00000553923 FAM209AQ5JX71 171 aa3.82□□□□□ -1.8
SRP54-204ENST00000553923 NAIF1Q69YI7 327 aaPredicted RBP3.82□□□□□ -1.8
SRP54-204ENST00000553923 EP400NLQ6ZTU2 488 aa3.82□□□□□ -1.8
SRP54-204ENST00000553923 SPATC1Q76KD6 591 aa3.82□□□□□ -1.8
SRP54-204ENST00000553923 NPM2Q86SE8 214 aaKnown RBP3.82□□□□□ -1.8
SRP54-204ENST00000553923 GLCCI1Q86VQ1 547 aa3.82□□□□□ -1.8
SRP54-204ENST00000553923 ANKRD53Q8N9V6 530 aa3.82□□□□□ -1.8
SRP54-204ENST00000553923 THAP3Q8WTV1 239 aaPredicted RBP3.82□□□□□ -1.8
SRP54-204ENST00000553923 PTGFRNQ9P2B2 879 aa3.82□□□□□ -1.8
SRP54-204ENST00000553923 MSRB2Q9Y3D2 182 aa3.82□□□□□ -1.8
SRP54-204ENST00000553923 R3HCC1Q9Y3T6 440 aaKnown RBP3.82□□□□□ -1.8
SRP54-204ENST00000553923 TRBV23-1A0A0A0MS06 115 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 INO80B-WBP1J3KQ70 363 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 MASP2O00187 686 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 H2AFYO75367 372 aaKnown RBP3.81□□□□□ -1.8
SRP54-204ENST00000553923 CRTAMO95727 393 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 ITGB1P05556 798 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 CLK3P49761 638 aaKnown RBP3.81□□□□□ -1.8
SRP54-204ENST00000553923 BPIFB4P59827 614 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 SUMO1P63165 101 aaKnown RBP3.81□□□□□ -1.8
SRP54-204ENST00000553923 SMAD3P84022 425 aaKnown RBP3.81□□□□□ -1.8
SRP54-204ENST00000553923 RAB33AQ14088 237 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 GAGE13Q4V321 117 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 FAM47CQ5HY64 1035 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 OVCH1Q7RTY7 1134 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 ZNF276Q8N554 614 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 HIPK4Q8NE63 616 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 CALML6Q8TD86 181 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 GFM2Q969S9 779 aaKnown RBP3.81□□□□□ -1.8
SRP54-204ENST00000553923 GMLQ99445 158 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 INO80BQ9C086 356 aaPredicted RBP3.81□□□□□ -1.8
SRP54-204ENST00000553923 RIOX1Q9H6W3 641 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 MAGEL2Q9UJ55 1249 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 DENND2AQ9ULE3 1009 aa3.81□□□□□ -1.8
SRP54-204ENST00000553923 ZAR1LA6NP61 321 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 RASGRP1O95267 797 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 NAT1P18440 290 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 KRTAP10-9P60411 292 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 GABREP78334 506 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 MAP3K12Q12852 859 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 TCIRG1Q13488 830 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 GNL2Q13823 731 aaKnown RBP3.8□□□□□ -1.8
SRP54-204ENST00000553923 FKBP15Q5T1M5 1219 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 SYCE2Q6PIF2 218 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 OLFML1Q6UWY5 402 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 CLEC14AQ86T13 490 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 CXorf67Q86X51 503 aaPredicted RBP3.8□□□□□ -1.8
SRP54-204ENST00000553923 ELOA2Q8IYF1 753 aaPredicted RBP3.8□□□□□ -1.8
SRP54-204ENST00000553923 CISD2Q8N5K1 135 aaKnown RBP3.8□□□□□ -1.8
SRP54-204ENST00000553923 ZBTB38Q8NAP3 1195 aaPredicted RBP3.8□□□□□ -1.8
SRP54-204ENST00000553923 MDGA1Q8NFP4 955 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 EXOC2Q96KP1 924 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 FOXB1Q99853 325 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 TCF25Q9BQ70 676 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 TOR3AQ9H497 397 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 PRDM13Q9H4Q3 707 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 SAE1Q9UBE0 346 aaPredicted RBP3.8□□□□□ -1.8
SRP54-204ENST00000553923 ZNHIT2Q9UHR6 403 aa3.8□□□□□ -1.8
SRP54-204ENST00000553923 RBM8AQ9Y5S9 174 aaKnown RBP3.8□□□□□ -1.8
SRP54-204ENST00000553923 GOLGA6L6A8MZA4 724 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 ABHD16AO95870 558 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 ZBTB48P10074 688 aaPredicted RBP3.79□□□□□ -1.8
SRP54-204ENST00000553923 ZNF37AP17032 561 aaPredicted RBP3.79□□□□□ -1.8
SRP54-204ENST00000553923 KCNA6P17658 529 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 PTTG1IPP53801 180 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 LY6G5CQ5SRR4 150 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 ZKSCAN2Q63HK3 967 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 LRRC55Q6ZSA7 311 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 ADGRG3Q86Y34 549 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 ZC3H7AQ8IWR0 971 aaKnown RBP3.79□□□□□ -1.8
SRP54-204ENST00000553923 PLA2G15Q8NCC3 412 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 PROKR1Q8TCW9 393 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 ATXN2LQ8WWM7 1075 aaKnown RBP3.79□□□□□ -1.8
SRP54-204ENST00000553923 CELF4Q9BZC1 486 aaKnown RBP3.79□□□□□ -1.8
SRP54-204ENST00000553923 IL23AQ9NPF7 189 aa3.79□□□□□ -1.8
SRP54-204ENST00000553923 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.78□□□□□ -1.8
SRP54-204ENST00000553923 KRTAP29-1A8MX34 341 aaPredicted RBP3.78□□□□□ -1.8
SRP54-204ENST00000553923 VSIG10L2P0DP72 767 aa3.78□□□□□ -1.8
SRP54-204ENST00000553923 PTPAQ15257 358 aa3.78□□□□□ -1.8
SRP54-204ENST00000553923 SLC43A3Q8NBI5 491 aa3.78□□□□□ -1.8
SRP54-204ENST00000553923 GSTCDQ8NEC7 633 aa3.78□□□□□ -1.8
SRP54-204ENST00000553923 GCDHQ92947 438 aaPredicted RBP3.78□□□□□ -1.8
SRP54-204ENST00000553923 PGBD4Q96DM1 585 aa3.78□□□□□ -1.8
SRP54-204ENST00000553923 ZNF512Q96ME7 567 aaPredicted RBP3.78□□□□□ -1.8
SRP54-204ENST00000553923 HAPLN2Q9GZV7 340 aa3.78□□□□□ -1.8
SRP54-204ENST00000553923 COQ6Q9Y2Z9 468 aa3.78□□□□□ -1.8
SRP54-204ENST00000553923 COX11Q9Y6N1 276 aa3.78□□□□□ -1.8
SRP54-204ENST00000553923 COL11A2P13942 1736 aaPredicted RBP3.78□□□□□ -1.8
SRP54-204ENST00000553923 SLC12A8A0AV02 714 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 B3GALT2O43825 422 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 MFAP3LO75121 409 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 TOX4O94842 621 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 PRLP01236 227 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms