RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 TRAPPC10P48553 1259 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 STAT5BP51692 787 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 CAMK1Q14012 370 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 PLCB4Q15147 1175 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 PTPAQ15257 358 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 SMAD2Q15796 467 aaKnown RBP17.93■□□□□ 0.46
ACTN1-209ENST00000553659 NPAS4Q8IUM7 802 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 TEX2Q8IWB9 1127 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 CYP2W1Q8TAV3 490 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 FAM200AQ8TCP9 573 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 UIMC1Q96RL1 719 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 CELF4Q9BZC1 486 aaKnown RBP17.93■□□□□ 0.46
ACTN1-209ENST00000553659 IGFLR1Q9H665 355 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 ALG13Q9NP73 1137 aaKnown RBP17.93■□□□□ 0.46
ACTN1-209ENST00000553659 PADI3Q9ULW8 664 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 MRPL42Q9Y6G3 142 aaKnown RBP17.93■□□□□ 0.46
ACTN1-209ENST00000553659 IGSF9BQ9UPX0 1349 aa17.93■□□□□ 0.46
ACTN1-209ENST00000553659 FNDC1Q4ZHG4 1894 aaPredicted RBP17.92■□□□□ 0.46
ACTN1-209ENST00000553659 PLXNA4Q9HCM2 1894 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 hCG_1984214I3L0E3 225 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 MBTPS2O43462 519 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 STAG3L1P0CL83 205 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 GTF2F1P35269 517 aaKnown RBP eCLIP17.92■□□□□ 0.46
ACTN1-209ENST00000553659 ACTR2P61160 394 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 TYRO3Q06418 890 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 TMEM62Q0P6H9 643 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 ADAM15Q13444 863 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 NME8Q8N427 588 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 ZNF713Q8N859 430 aaPredicted RBP17.92■□□□□ 0.46
ACTN1-209ENST00000553659 CCDC12Q8WUD4 166 aaPredicted RBP17.92■□□□□ 0.46
ACTN1-209ENST00000553659 PDLIM2Q96JY6 352 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 RIC8AQ9NPQ8 531 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 KCNJ14Q9UNX9 436 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 KDM3AQ9Y4C1 1321 aa17.92■□□□□ 0.46
ACTN1-209ENST00000553659 SMIM35A0A1B0GVV1 85 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 ATG7O95352 703 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 FOSP01100 380 aaPredicted RBP17.91■□□□□ 0.46
ACTN1-209ENST00000553659 ARP10275 920 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 IRS1P35568 1242 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 PAK2Q13177 524 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 SNW1Q13573 536 aaKnown RBP17.91■□□□□ 0.46
ACTN1-209ENST00000553659 CLUL1Q15846 466 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 AXDND1Q5T1B0 1012 aaPredicted RBP17.91■□□□□ 0.46
ACTN1-209ENST00000553659 WWC2Q6AWC2 1192 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 FAM43BQ6ZT52 329 aaPredicted RBP17.91■□□□□ 0.46
ACTN1-209ENST00000553659 ELOA2Q8IYF1 753 aaPredicted RBP17.91■□□□□ 0.46
ACTN1-209ENST00000553659 FMR1NBQ8N0W7 255 aaPredicted RBP17.91■□□□□ 0.46
ACTN1-209ENST00000553659 KRI1Q8N9T8 703 aaKnown RBP17.91■□□□□ 0.46
ACTN1-209ENST00000553659 ZNF579Q8NAF0 562 aaKnown RBP17.91■□□□□ 0.46
ACTN1-209ENST00000553659 SPPL3Q8TCT6 385 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 TRAPPC12Q8WVT3 735 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 PPP2R3CQ969Q6 453 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 POP1Q99575 1024 aaKnown RBP17.91■□□□□ 0.46
ACTN1-209ENST00000553659 MUC6Q6W4X9 2439 aa17.91■□□□□ 0.46
ACTN1-209ENST00000553659 WDR81Q562E7 1941 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 LINC01565O15544 149 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 TBX10O75333 385 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 ITGB1P05556 798 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 DNAJB1P25685 340 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 SLC26A2P50443 739 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 NAPAP54920 295 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 NLRP5P59047 1200 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 KRT76Q01546 638 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 SMAD4Q13485 552 aaKnown RBP17.9■□□□□ 0.46
ACTN1-209ENST00000553659 CAMK4Q16566 473 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 STX1AQ16623 288 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 CEP55Q53EZ4 464 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 MTHFD1LQ6UB35 978 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 KLHL23Q8NBE8 558 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 RNF214Q8ND24 703 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 CCDC34Q96HJ3 373 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 GOLPH3LQ9H4A5 285 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 AGO4Q9HCK5 861 aaKnown RBP17.9■□□□□ 0.46
ACTN1-209ENST00000553659 FAM13BQ9NYF5 915 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 VPS54Q9P1Q0 977 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 CD207Q9UJ71 328 aa17.9■□□□□ 0.46
ACTN1-209ENST00000553659 IGKV6D-21A0A0A0MT36 114 aa17.89■□□□□ 0.45
ACTN1-209ENST00000553659 MEIS1O00470 390 aa17.89■□□□□ 0.45
ACTN1-209ENST00000553659 CSPG5O95196 566 aa17.89■□□□□ 0.45
ACTN1-209ENST00000553659 ITGB3BPQ13352 177 aaPredicted RBP17.89■□□□□ 0.45
ACTN1-209ENST00000553659 ZRSR1Q15695 479 aaKnown RBP17.89■□□□□ 0.45
ACTN1-209ENST00000553659 PAN2Q504Q3 1202 aaKnown RBP17.89■□□□□ 0.45
ACTN1-209ENST00000553659 TYW1BQ6NUM6 668 aa17.89■□□□□ 0.45
ACTN1-209ENST00000553659 PPP1R18Q6NYC8 613 aa17.89■□□□□ 0.45
ACTN1-209ENST00000553659 DAGLBQ8NCG7 672 aa17.89■□□□□ 0.45
ACTN1-209ENST00000553659 ANO3Q9BYT9 981 aa17.89■□□□□ 0.45
ACTN1-209ENST00000553659 TMX1Q9H3N1 280 aa17.89■□□□□ 0.45
ACTN1-209ENST00000553659 ANO10Q9NW15 660 aa17.89■□□□□ 0.45
ACTN1-209ENST00000553659 HOOK1Q9UJC3 728 aaKnown RBP17.89■□□□□ 0.45
ACTN1-209ENST00000553659 LRFN2Q9ULH4 789 aa17.89■□□□□ 0.45
ACTN1-209ENST00000553659 HBP1O60381 514 aa17.88■□□□□ 0.45
ACTN1-209ENST00000553659 KLRC1P26715 233 aa17.88■□□□□ 0.45
ACTN1-209ENST00000553659 ADCY7P51828 1080 aa17.88■□□□□ 0.45
ACTN1-209ENST00000553659 NFX1Q12986 1120 aaKnown RBP17.88■□□□□ 0.45
ACTN1-209ENST00000553659 RESP18Q5W5W9 173 aa17.88■□□□□ 0.45
ACTN1-209ENST00000553659 POF1BQ8WVV4 589 aa17.88■□□□□ 0.45
ACTN1-209ENST00000553659 MSLNLQ96KJ4 702 aa17.88■□□□□ 0.45
ACTN1-209ENST00000553659 NAT10Q9H0A0 1025 aaKnown RBP17.88■□□□□ 0.45
ACTN1-209ENST00000553659 GLT8D2Q9H1C3 349 aa17.88■□□□□ 0.45
ACTN1-209ENST00000553659 KCNH6Q9H252 994 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms