RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RNF40O75150 1001 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 SYF2O95926 243 aaKnown RBP14.09□□□□□ -0.15
SHMT2-205ENST00000553474 ICAM1P05362 532 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 IVLP07476 585 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 CAP2P40123 477 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 LMAN1P49257 510 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 TNNC1P63316 161 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 CTTNQ14247 550 aaKnown RBP14.09□□□□□ -0.15
SHMT2-205ENST00000553474 ZNF571Q7Z3V5 609 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-205ENST00000553474 MCF2L2Q86YR7 1114 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 INPP4AQ96PE3 977 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-205ENST00000553474 UIMC1Q96RL1 719 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 FIZ1Q96SL8 496 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 MXRA8Q9BRK3 442 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 TIPINQ9BVW5 301 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 STK33Q9BYT3 514 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 SIX2Q9NPC8 291 aa14.09□□□□□ -0.15
SHMT2-205ENST00000553474 IPO5O00410 1097 aaKnown RBP14.08□□□□□ -0.16
SHMT2-205ENST00000553474 OPA1O60313 960 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 N4BP1O75113 896 aaKnown RBP14.08□□□□□ -0.16
SHMT2-205ENST00000553474 YY1P25490 414 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 HIRAP54198 1017 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-205ENST00000553474 ARID5AQ03989 594 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 RPS6KA1Q15418 735 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 ANGEL2Q5VTE6 544 aaKnown RBP14.08□□□□□ -0.16
SHMT2-205ENST00000553474 LDHDQ86WU2 507 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 SLC17A8Q8NDX2 589 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 ACTRT1Q8TDG2 376 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 AFAP1L1Q8TED9 768 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 PIGOQ8TEQ8 1089 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 LPAR1Q92633 364 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 ZBED3Q96IU2 234 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-205ENST00000553474 STRA6Q9BX79 667 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 TMEM206Q9H813 350 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 GPBP1L1Q9HC44 474 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-205ENST00000553474 GDF3Q9NR23 364 aa14.08□□□□□ -0.16
SHMT2-205ENST00000553474 RBM12Q9NTZ6 932 aaKnown RBP14.08□□□□□ -0.16
SHMT2-205ENST00000553474 LARSQ9P2J5 1176 aaKnown RBP14.08□□□□□ -0.16
SHMT2-205ENST00000553474 DMGDHQ9UI17 866 aaKnown RBP14.08□□□□□ -0.16
SHMT2-205ENST00000553474 RPTORQ8N122 1335 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 P4HA2O15460 535 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 H2AFZP0C0S5 128 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 MYBL2P10244 700 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 ACTN1P12814 892 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 CXCR5P32302 372 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 FMO5P49326 533 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 PPFIA1Q13136 1202 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 PAK2Q13177 524 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 ZSCAN26Q16670 478 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 KIAA1755Q5JYT7 1200 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 CCDC174Q6PII3 467 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 H2AFVQ71UI9 128 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 C12orf56Q8IXR9 622 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 MREGQ8N565 214 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 FAM204AQ9H8W3 233 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 TMEM59LQ9UK28 342 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 DBR1Q9UK59 544 aaKnown RBP14.07□□□□□ -0.16
SHMT2-205ENST00000553474 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
SHMT2-205ENST00000553474 ARHGEF35A5YM69 484 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 GOLGA8KD6RF30 607 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 MAPK13O15264 365 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 NCK2O43639 380 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 PPP1R37O75864 691 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 LYPLA2O95372 231 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 P4HBP07237 508 aaKnown RBP14.06□□□□□ -0.16
SHMT2-205ENST00000553474 POTEJP0CG39 1038 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 CAPN2P17655 700 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 CASP4P49662 377 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 CLUL1Q15846 466 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 ODR4Q5SWX8 454 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 USP50Q70EL3 339 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-205ENST00000553474 SLFN11Q7Z7L1 901 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 LRRC57Q8N9N7 239 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 PRPF38AQ8NAV1 312 aaKnown RBP14.06□□□□□ -0.16
SHMT2-205ENST00000553474 USP38Q8NB14 1042 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 RBM46Q8TBY0 533 aaKnown RBP14.06□□□□□ -0.16
SHMT2-205ENST00000553474 LXNQ9BS40 222 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 UNC45AQ9H3U1 944 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 AGPAT3Q9NRZ7 376 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 DIS3Q9Y2L1 958 aaKnown RBP14.06□□□□□ -0.16
SHMT2-205ENST00000553474 CCDC188H7C350 402 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 WDR46O15213 610 aaKnown RBP14.06□□□□□ -0.16
SHMT2-205ENST00000553474 CLIC2O15247 247 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 KIF4AO95239 1232 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 FDX1P10109 184 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 NMT1P30419 496 aaKnown RBP14.06□□□□□ -0.16
SHMT2-205ENST00000553474 SOX5P35711 763 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 HNRNPH2P55795 449 aaKnown RBP14.06□□□□□ -0.16
SHMT2-205ENST00000553474 CETN1Q12798 172 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 PNMA8AQ86V59 439 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-205ENST00000553474 WHAMMQ8TF30 809 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 IWS1Q96ST2 819 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 SH3GL2Q99962 352 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 ST6GALNAC4Q9H4F1 302 aa14.06□□□□□ -0.16
SHMT2-205ENST00000553474 SUCLA2Q9P2R7 463 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-205ENST00000553474 F8VZ95 297 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 PMM2O15305 246 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 CHMP2AO43633 222 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 ZMYND10O75800 440 aa14.05□□□□□ -0.16
SHMT2-205ENST00000553474 FTCDO95954 541 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms