RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 UBA6A0AVT1 1052 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-209ENST00000553280 ANO9A1A5B4 782 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 OR14I1A6ND48 311 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 NDUFS2O75306 463 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 OFD1O75665 1012 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 PRPF6O94906 941 aaKnown RBP6.46□□□□□ -1.38
SCFD1-209ENST00000553280 ZBTB7AO95365 584 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 CYBBP04839 570 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 DBHP09172 617 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 SLC5A3P53794 718 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 DLG4P78352 724 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 GRIN1Q05586 938 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 TTC38Q5R3I4 469 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 CCDC62Q6P9F0 684 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 PAQR3Q6TCH7 311 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 CHST15Q7LFX5 561 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-209ENST00000553280 KANSL1Q7Z3B3 1105 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 ERCC4Q92889 916 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-209ENST00000553280 TTC17Q96AE7 1141 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 TAAR9Q96RI9 348 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 TUBGCP5Q96RT8 1024 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 MYL10Q9BUA6 226 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 TNFRSF12AQ9NP84 129 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 BTBD7Q9P203 1132 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 DDX20Q9UHI6 824 aaKnown RBP6.46□□□□□ -1.38
SCFD1-209ENST00000553280 USP25Q9UHP3 1055 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 SAP30BPQ9UHR5 308 aaKnown RBP6.46□□□□□ -1.38
SCFD1-209ENST00000553280 TMPRSS11EQ9UL52 423 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 EDARQ9UNE0 448 aa6.46□□□□□ -1.38
SCFD1-209ENST00000553280 NUAK1O60285 661 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 LDHAP00338 332 aaKnown RBP6.45□□□□□ -1.38
SCFD1-209ENST00000553280 NBPF7P0C2Y1 421 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-209ENST00000553280 OSMP13725 252 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 AOAHP28039 575 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 LINC00310P59036 64 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 DBPQ10586 325 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-209ENST00000553280 PICALMQ13492 652 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 GALEQ14376 348 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 SLC9A5Q14940 896 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 MUM1Q2TAK8 710 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 COBLL1Q53SF7 1204 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 ZBTB41Q5SVQ8 909 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 LYSMD2Q8IV50 215 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 FAM43AQ8N2R8 423 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 HIPK4Q8NE63 616 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 RSAD2Q8WXG1 361 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 HPS3Q969F9 1004 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 SLC2A13Q96QE2 648 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 RNF38Q9H0F5 515 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 RXFP1Q9HBX9 757 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 HSPBP1Q9NZL4 362 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 PTPN22Q9Y2R2 807 aa6.45□□□□□ -1.38
SCFD1-209ENST00000553280 ZC3H12DA2A288 527 aaKnown RBP6.44□□□□□ -1.38
SCFD1-209ENST00000553280 PRAMEF22A3QJZ6 481 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 F8W031 263 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-209ENST00000553280 PEX10O60683 326 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 LPLP06858 475 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 ZNF267Q14586 743 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-209ENST00000553280 MYBPC3Q14896 1274 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 SAFBQ15424 915 aaKnown RBP eCLIP6.44□□□□□ -1.38
SCFD1-209ENST00000553280 LONRF3Q496Y0 759 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 PRAMEF18Q5VWM3 479 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 CIAPIN1Q6FI81 312 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 KIAA1841Q6NSI8 718 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 LILRA6Q6PI73 481 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 AUTS2Q8WXX7 1259 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 FERMT2Q96AC1 680 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 FOXB1Q99853 325 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 GTPBP4Q9BZE4 634 aaKnown RBP6.44□□□□□ -1.38
SCFD1-209ENST00000553280 GCM1Q9NP62 436 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 TUBD1Q9UJT1 453 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 DNM3Q9UQ16 869 aa6.44□□□□□ -1.38
SCFD1-209ENST00000553280 TEX51A0A1B0GUA7 166 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 SEMA7AO75326 666 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 PRLP01236 227 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 USP14P54578 494 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 ERVFRD-1P60508 538 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 SRSF3P84103 164 aaKnown RBP6.43□□□□□ -1.38
SCFD1-209ENST00000553280 SLC6A3Q01959 620 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 KIF23Q02241 960 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-209ENST00000553280 ALDH6A1Q02252 535 aaKnown RBP6.43□□□□□ -1.38
SCFD1-209ENST00000553280 ROM1Q03395 351 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 ADCY2Q08462 1091 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 MORC3Q14149 939 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 NR1I3Q14994 352 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 ANO4Q32M45 955 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 LCE4AQ5TA78 99 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 MBNL2Q5VZF2 373 aaKnown RBP6.43□□□□□ -1.38
SCFD1-209ENST00000553280 IL31Q6EBC2 164 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 UNQ6494/PRO21346Q6UXR6 183 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 C11orf96Q7Z7L8 435 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 THEMISQ8N1K5 641 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-209ENST00000553280 PRR18Q8N4B5 295 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 COA7Q96BR5 231 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 MAP3K14Q99558 947 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 KCTD10Q9H3F6 313 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 PRDM12Q9H4Q4 367 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 IFT122Q9HBG6 1241 aa6.43□□□□□ -1.38
SCFD1-209ENST00000553280 DPP7Q9UHL4 492 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms