RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 SLC16A3O15427 465 aaKnown RBP10.83□□□□□ -0.68
TMEM116-216ENST00000552800 CALUO43852 315 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-216ENST00000552800 ZNF862O60290 1169 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 IGHA2P01877 340 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 GYPCP04921 128 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 SUPT20HL2P0C7V6 817 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 PLS3P13797 630 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 RPL13P26373 211 aaKnown RBP10.83□□□□□ -0.68
TMEM116-216ENST00000552800 NCKAP1LP55160 1127 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 CNTN2Q02246 1040 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 LRMPQ12912 555 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 TTLL12Q14166 644 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-216ENST00000552800 TARBP2Q15633 366 aaKnown RBP10.83□□□□□ -0.68
TMEM116-216ENST00000552800 MEA1Q16626 185 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 VWA3BQ502W6 1294 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 XKR3Q5GH77 459 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 ANO5Q75V66 913 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 SFR1Q86XK3 245 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 GLIS3Q8NEA6 775 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 BRI3BPQ8WY22 251 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 EMID1Q96A84 441 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-216ENST00000552800 HHIPL1Q96JK4 782 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 CNOT6LQ96LI5 555 aaKnown RBP10.83□□□□□ -0.68
TMEM116-216ENST00000552800 DNAJC7Q99615 494 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 NDST4Q9H3R1 872 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 TMEM206Q9H813 350 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 DDX41Q9UJV9 622 aaKnown RBP10.83□□□□□ -0.68
TMEM116-216ENST00000552800 FBXL5Q9UKA1 691 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 USP20Q9Y2K6 914 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 DAAM1Q9Y4D1 1078 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 ZNF236Q9UL36 1845 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 GSTTP1A0A1W2PQM5 241 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 ARHGEF35A5YM69 484 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 ASB14A6NK59 587 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 BHMG1C9JSJ3 638 aaPredicted RBP10.82□□□□□ -0.68
TMEM116-216ENST00000552800 TRAF5O00463 557 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 CETN3O15182 167 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 CCP110O43303 1012 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 TBCAO75347 108 aaKnown RBP10.82□□□□□ -0.68
TMEM116-216ENST00000552800 DGAT1O75907 488 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 FARP2O94887 1054 aaPredicted RBP10.82□□□□□ -0.68
TMEM116-216ENST00000552800 SLC26A2P50443 739 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 CASP5P51878 434 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 ACTR2P61160 394 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 TBC1D8BQ0IIM8 1120 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 PLS1Q14651 629 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 FAM110CQ1W6H9 321 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 DPY19L2P1Q6NXN4 242 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 MIS18BP1Q6P0N0 1132 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 METTL7BQ6UX53 244 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 PLPPR4Q7Z2D5 763 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 TMTC1Q8IUR5 882 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 EXOC8Q8IYI6 725 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 BANK1Q8NDB2 785 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 SYN2Q92777 582 aaPredicted RBP10.82□□□□□ -0.68
TMEM116-216ENST00000552800 KIFAP3Q92845 792 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 DRC1Q96MC2 740 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 FGFBP2Q9BYJ0 223 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 TCEAL9Q9UHQ7 104 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 SIK3Q9Y2K2 1263 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 ADGRA2Q96PE1 1338 aa10.82□□□□□ -0.68
TMEM116-216ENST00000552800 RSPH10B2B2RC85 870 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 KIF2AO00139 706 aaPredicted RBP10.81□□□□□ -0.68
TMEM116-216ENST00000552800 PDHXO00330 501 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 MFAP3LO75121 409 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 FAM13AO94988 1023 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 OATP04181 439 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 SSBP05455 408 aaKnown RBP eCLIP10.81□□□□□ -0.68
TMEM116-216ENST00000552800 KRT18P05783 430 aaKnown RBP10.81□□□□□ -0.68
TMEM116-216ENST00000552800 TPM2P07951 284 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 RSPH10BP0C881 870 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 ATP4AP20648 1035 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 UBXN1Q04323 297 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 RBL2Q08999 1139 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 FSTL1Q12841 308 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 ADAM9Q13443 819 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 KCTD2Q14681 263 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 LRRC41Q15345 812 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 E4F1Q66K89 784 aaPredicted RBP10.81□□□□□ -0.68
TMEM116-216ENST00000552800 METTL3Q86U44 580 aaKnown RBP10.81□□□□□ -0.68
TMEM116-216ENST00000552800 NCAPG2Q86XI2 1143 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 FAM178BQ8IXR5 827 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 CCAR2Q8N163 923 aaKnown RBP10.81□□□□□ -0.68
TMEM116-216ENST00000552800 MYCT1Q8N699 235 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 MCPH1Q8NEM0 835 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 OR8K1Q8NGG5 319 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 SEPT1Q8WYJ6 367 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 MMP19Q99542 508 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 BAG1Q99933 345 aaPredicted RBP10.81□□□□□ -0.68
TMEM116-216ENST00000552800 PTPN18Q99952 460 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 NOC4LQ9BVI4 516 aaKnown RBP10.81□□□□□ -0.68
TMEM116-216ENST00000552800 VPS16Q9H269 839 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 DHX33Q9H6R0 707 aaKnown RBP10.81□□□□□ -0.68
TMEM116-216ENST00000552800 MRPL44Q9H9J2 332 aaKnown RBP10.81□□□□□ -0.68
TMEM116-216ENST00000552800 PLCB1Q9NQ66 1216 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 PLAGL2Q9UPG8 496 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 PASKQ96RG2 1323 aa10.81□□□□□ -0.68
TMEM116-216ENST00000552800 CCL15-CCL14A0A0B4J2E2 113 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 IGKV6-21A0A0C4DH24 114 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms