RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 BPIFB4P59827 614 aa5.51□□□□□ -1.53
USP44-207ENST00000552237 GUCY1A3Q02108 690 aa5.51□□□□□ -1.53
USP44-207ENST00000552237 RAB33AQ14088 237 aa5.51□□□□□ -1.53
USP44-207ENST00000552237 C16orf59Q7L2K0 433 aa5.51□□□□□ -1.53
USP44-207ENST00000552237 GLCCI1Q86VQ1 547 aa5.51□□□□□ -1.53
USP44-207ENST00000552237 MB21D1Q8N884 522 aa5.51□□□□□ -1.53
USP44-207ENST00000552237 ASB15Q8WXK1 588 aa5.51□□□□□ -1.53
USP44-207ENST00000552237 GFM2Q969S9 779 aaKnown RBP5.51□□□□□ -1.53
USP44-207ENST00000552237 TCF25Q9BQ70 676 aa5.51□□□□□ -1.53
USP44-207ENST00000552237 RCAN3Q9UKA8 241 aa5.51□□□□□ -1.53
USP44-207ENST00000552237 UBE2QL1A1L167 161 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 CCDC66A2RUB6 948 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 ZNF561-AS1K7EIQ3 104 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 SCDO00767 359 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 B3GALT2O43825 422 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 ERBB2P04626 1255 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 ITGB1P05556 798 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 FKBP15Q5T1M5 1219 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 PCDH19Q8TAB3 1148 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 SREK1Q8WXA9 508 aaKnown RBP5.5□□□□□ -1.53
USP44-207ENST00000552237 ARL8AQ96BM9 186 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 GBP4Q96PP9 640 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 HIRIP3Q9BW71 556 aaPredicted RBP5.5□□□□□ -1.53
USP44-207ENST00000552237 SAE1Q9UBE0 346 aaPredicted RBP5.5□□□□□ -1.53
USP44-207ENST00000552237 FZD1Q9UP38 647 aa5.5□□□□□ -1.53
USP44-207ENST00000552237 A0A0A6YYK5 440 aaPredicted RBP5.49□□□□□ -1.53
USP44-207ENST00000552237 CCDC85CA6NKD9 419 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 FOXP2O15409 715 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 MFAP3LO75121 409 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 IPO13O94829 963 aaKnown RBP5.49□□□□□ -1.53
USP44-207ENST00000552237 APPP05067 770 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 ZNF37AP17032 561 aaPredicted RBP5.49□□□□□ -1.53
USP44-207ENST00000552237 HECTD2Q5U5R9 776 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 KRT40Q6A162 431 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 MFSD5Q6N075 450 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 LRRC55Q6ZSA7 311 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 ZC3H7AQ8IWR0 971 aaKnown RBP5.49□□□□□ -1.53
USP44-207ENST00000552237 ELOA2Q8IYF1 753 aaPredicted RBP5.49□□□□□ -1.53
USP44-207ENST00000552237 PMFBP1Q8TBY8 1022 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 PTPRN2Q92932 1015 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 IPO9Q96P70 1041 aaKnown RBP5.49□□□□□ -1.53
USP44-207ENST00000552237 BBC3Q96PG8 261 aaPredicted RBP5.49□□□□□ -1.53
USP44-207ENST00000552237 FAM193BQ96PV7 902 aaPredicted RBP5.49□□□□□ -1.53
USP44-207ENST00000552237 MNTQ99583 582 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 CYP4F11Q9HBI6 524 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 SMURF1Q9HCE7 757 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 ASB1Q9Y576 335 aa5.49□□□□□ -1.53
USP44-207ENST00000552237 KLRG2A4D1S0 409 aaPredicted RBP5.48□□□□□ -1.53
USP44-207ENST00000552237 TCIRG1Q13488 830 aa5.48□□□□□ -1.53
USP44-207ENST00000552237 RHOUQ7L0Q8 258 aa5.48□□□□□ -1.53
USP44-207ENST00000552237 CISD2Q8N5K1 135 aaKnown RBP5.48□□□□□ -1.53
USP44-207ENST00000552237 ST13P5Q8NFI4 369 aaPredicted RBP5.48□□□□□ -1.53
USP44-207ENST00000552237 THAP3Q8WTV1 239 aaPredicted RBP5.48□□□□□ -1.53
USP44-207ENST00000552237 ERCC4Q92889 916 aaPredicted RBP5.48□□□□□ -1.53
USP44-207ENST00000552237 ARMC5Q96C12 935 aa5.48□□□□□ -1.53
USP44-207ENST00000552237 GPHA2Q96T91 129 aa5.48□□□□□ -1.53
USP44-207ENST00000552237 CDC6Q99741 560 aa5.48□□□□□ -1.53
USP44-207ENST00000552237 IL23AQ9NPF7 189 aa5.48□□□□□ -1.53
USP44-207ENST00000552237 KCNH7Q9NS40 1196 aa5.48□□□□□ -1.53
USP44-207ENST00000552237 TRPS1Q9UHF7 1281 aa5.48□□□□□ -1.53
USP44-207ENST00000552237 DENND2AQ9ULE3 1009 aa5.48□□□□□ -1.53
USP44-207ENST00000552237 ARVCFO00192 962 aa5.47□□□□□ -1.53
USP44-207ENST00000552237 KIAA0355O15063 1070 aa5.47□□□□□ -1.53
USP44-207ENST00000552237 RABGGTBP53611 331 aa5.47□□□□□ -1.53
USP44-207ENST00000552237 SEC23AQ15436 765 aa5.47□□□□□ -1.53
USP44-207ENST00000552237 TIGD2Q4W5G0 525 aa5.47□□□□□ -1.53
USP44-207ENST00000552237 EPHA10Q5JZY3 1008 aa5.47□□□□□ -1.53
USP44-207ENST00000552237 OLFML1Q6UWY5 402 aa5.47□□□□□ -1.53
USP44-207ENST00000552237 NTN5Q8WTR8 489 aaPredicted RBP5.47□□□□□ -1.53
USP44-207ENST00000552237 DNAJC2Q99543 621 aaKnown RBP5.47□□□□□ -1.53
USP44-207ENST00000552237 TOR3AQ9H497 397 aa5.47□□□□□ -1.53
USP44-207ENST00000552237 MAGEL2Q9UJ55 1249 aa5.47□□□□□ -1.53
USP44-207ENST00000552237 GRID2IPA4D2P6 1211 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 HIP1RO75146 1068 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 MAFO75444 373 aaPredicted RBP5.46□□□□□ -1.54
USP44-207ENST00000552237 RECQL4O94761 1208 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 KRTAP10-11P60412 298 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 RBL2Q08999 1139 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 TMEM132BQ14DG7 1078 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 NBPF6Q5VWK0 638 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 BCL6BQ8N143 479 aaPredicted RBP5.46□□□□□ -1.54
USP44-207ENST00000552237 CPT1CQ8TCG5 803 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 NBPF4Q96M43 638 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 DRC1Q96MC2 740 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 SIRPGQ9P1W8 387 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 NCDNQ9UBB6 729 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 SORCS3Q9UPU3 1222 aa5.46□□□□□ -1.54
USP44-207ENST00000552237 GNAT2P19087 354 aa5.45□□□□□ -1.54
USP44-207ENST00000552237 SUMO1P63165 101 aaKnown RBP5.45□□□□□ -1.54
USP44-207ENST00000552237 GAGE13Q4V321 117 aa5.45□□□□□ -1.54
USP44-207ENST00000552237 BHLHA9Q7RTU4 235 aa5.45□□□□□ -1.54
USP44-207ENST00000552237 RD3Q7Z3Z2 195 aa5.45□□□□□ -1.54
USP44-207ENST00000552237 BEND2Q8NDZ0 799 aa5.45□□□□□ -1.54
USP44-207ENST00000552237 C2orf78A6NCI8 922 aa5.44□□□□□ -1.54
USP44-207ENST00000552237 KRTAP29-1A8MX34 341 aaPredicted RBP5.44□□□□□ -1.54
USP44-207ENST00000552237 PDPK1O15530 556 aa5.44□□□□□ -1.54
USP44-207ENST00000552237 USP14P54578 494 aa5.44□□□□□ -1.54
USP44-207ENST00000552237 LACTBP83111 547 aaPredicted RBP5.44□□□□□ -1.54
USP44-207ENST00000552237 PLEKHG4Q58EX7 1191 aa5.44□□□□□ -1.54
USP44-207ENST00000552237 SOGA3Q5TF21 947 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms