RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 NGRNQ9NPE2 291 aaKnown RBP14.53□□□□□ -0.08
PTCH1-221ENST00000550914 SH3GLB2Q9NR46 395 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 DISC1Q9NRI5 854 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 NRBP2Q9NSY0 501 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 AKT3Q9Y243 479 aa14.53□□□□□ -0.08
PTCH1-221ENST00000550914 PER2O15055 1255 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 ZNF862O60290 1169 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 OATP04181 439 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 ZSCAN20P17040 1043 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-221ENST00000550914 IFNAR1P17181 557 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 JAK3P52333 1124 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 EVCP57679 992 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 KCNC3Q14003 757 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 TRIM67Q6ZTA4 783 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 RDM1Q8NG50 284 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 RSPH1Q8WYR4 309 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 PHKBQ93100 1093 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 CASD1Q96PB1 797 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 PPP1R16BQ96T49 567 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 MYO10Q9HD67 2058 aa14.52□□□□□ -0.09
PTCH1-221ENST00000550914 USP34Q70CQ2 3546 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 MSH4O15457 936 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 EOMESO95936 686 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 DARSP14868 501 aaKnown RBP14.51□□□□□ -0.09
PTCH1-221ENST00000550914 CPA1P15085 419 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 HOXB8P17481 243 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-221ENST00000550914 RPS6KB1P23443 525 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 GPC3P51654 580 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 ZXDAP98168 799 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 CDC42EP1Q00587 391 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 PRKCEQ02156 737 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 KRT17Q04695 432 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 KCNT2Q6UVM3 1135 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 LRRC55Q6ZSA7 311 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 ALYREFQ86V81 257 aaKnown RBP14.51□□□□□ -0.09
PTCH1-221ENST00000550914 ECHDC2Q86YB7 292 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 ABI1Q8IZP0 508 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 FAM177A1Q8N128 213 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-221ENST00000550914 VN1R2Q8NFZ6 395 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 SLC5A5Q92911 643 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 ZNF558Q96NG5 402 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 PRRX2Q99811 253 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 C22orf23Q9BZE7 217 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 RNF19AQ9NV58 838 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 HCSTQ9UBK5 93 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 SNX14Q9Y5W7 946 aa14.51□□□□□ -0.09
PTCH1-221ENST00000550914 A0A0U1RQF3 1178 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 CARNS1A5YM72 827 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 TMEM221A6NGB7 291 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 M0R296 226 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 EDIL3O43854 480 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 GAS7O60861 476 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 PSMA5P28066 241 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 TBC1D8BQ0IIM8 1120 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 TARBP2Q15633 366 aaKnown RBP14.5□□□□□ -0.09
PTCH1-221ENST00000550914 TRMT1LQ7Z2T5 733 aaKnown RBP14.5□□□□□ -0.09
PTCH1-221ENST00000550914 SKAP1Q86WV1 359 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 LRRC71Q8N4P6 559 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 CCDC136Q96JN2 1154 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 TCF25Q9BQ70 676 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 TEKT3Q9BXF9 490 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 SLC26A6Q9BXS9 759 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 S1PR5Q9H228 398 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 ENTPD7Q9NQZ7 604 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 DACT1Q9NYF0 836 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 SPG21Q9NZD8 308 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 KMT2EQ8IZD2 1858 aa14.5□□□□□ -0.09
PTCH1-221ENST00000550914 MRE11P49959 708 aa14.49□□□□□ -0.09
PTCH1-221ENST00000550914 SIGLEC14Q08ET2 396 aa14.49□□□□□ -0.09
PTCH1-221ENST00000550914 Q4G0T1 1027 aa14.49□□□□□ -0.09
PTCH1-221ENST00000550914 LRCH2Q5VUJ6 765 aa14.49□□□□□ -0.09
PTCH1-221ENST00000550914 PLPP4Q5VZY2 271 aa14.49□□□□□ -0.09
PTCH1-221ENST00000550914 ANKRD54Q6NXT1 300 aa14.49□□□□□ -0.09
PTCH1-221ENST00000550914 ZNF598Q86UK7 904 aaKnown RBP14.49□□□□□ -0.09
PTCH1-221ENST00000550914 PBXIP1Q96AQ6 731 aa14.49□□□□□ -0.09
PTCH1-221ENST00000550914 TRAIPQ9BWF2 469 aa14.49□□□□□ -0.09
PTCH1-221ENST00000550914 MRPL9Q9BYD2 267 aaKnown RBP14.49□□□□□ -0.09
PTCH1-221ENST00000550914 NIFKQ9BYG3 293 aaKnown RBP14.49□□□□□ -0.09
PTCH1-221ENST00000550914 CHST12Q9NRB3 414 aa14.49□□□□□ -0.09
PTCH1-221ENST00000550914 VPS54Q9P1Q0 977 aa14.49□□□□□ -0.09
PTCH1-221ENST00000550914 CYP3A7-CYP3A51PA0A087WV96 503 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 PSMD10O75832 226 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 REC8O95072 547 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 CYP3A7P24462 503 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 PDIA3P30101 505 aaKnown RBP14.48□□□□□ -0.09
PTCH1-221ENST00000550914 TECP42680 631 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 NLRP5P59047 1200 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 RBM10P98175 930 aaKnown RBP14.48□□□□□ -0.09
PTCH1-221ENST00000550914 UGCGQ16739 394 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 XKR3Q5GH77 459 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 CLLU1OSQ5K130 101 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 SYCE2Q6PIF2 218 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 TMC7Q7Z402 723 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 TRIM22Q8IYM9 498 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 NLRP7Q8WX94 980 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 CASP10Q92851 521 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 RPGRIP1Q96KN7 1286 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 SCLT1Q96NL6 688 aa14.48□□□□□ -0.09
PTCH1-221ENST00000550914 GCOM2Q9BZD3 368 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-221ENST00000550914 UNC45AQ9H3U1 944 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms