RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 INSM1Q01101 510 aaPredicted RBP12.03□□□□□ -0.48
VPS29-208ENST00000550267 TROAPQ12815 778 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 HDAC1Q13547 482 aaPredicted RBP12.03□□□□□ -0.48
VPS29-208ENST00000550267 KCNC3Q14003 757 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 FAM102BQ5T8I3 360 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 PLPP4Q5VZY2 271 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 LLGL2Q6P1M3 1020 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 THNSL1Q8IYQ7 743 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 TMEM105Q8N8V8 129 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 COLGALT1Q8NBJ5 622 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 IL25Q9H293 177 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 TMEM260Q9NX78 707 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 PCDHB7Q9Y5E2 793 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 PCDHA2Q9Y5H9 948 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 MYO15AQ9UKN7 3530 aa12.03□□□□□ -0.48
VPS29-208ENST00000550267 FSD2A1L4K1 749 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 SRGAP2BP0DMP2 458 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 NBL1P41271 181 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 WTAPQ15007 396 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 PDE12Q6L8Q7 609 aaKnown RBP12.02□□□□□ -0.49
VPS29-208ENST00000550267 B4GALNT3Q6L9W6 998 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 TMEM184AQ6ZMB5 413 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 PLEKHM2Q8IWE5 1019 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 CDHR1Q96JP9 859 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 SMOC2Q9H3U7 446 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 TYW1Q9NV66 732 aaKnown RBP12.02□□□□□ -0.49
VPS29-208ENST00000550267 UBIAD1Q9Y5Z9 338 aa12.02□□□□□ -0.49
VPS29-208ENST00000550267 ERICH2A1L162 156 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 HIDE1A8MVS5 230 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 HIP1O00291 1037 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 BRD1O95696 1058 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 KRT76Q01546 638 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 TRDNQ13061 729 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 MTMR1Q13613 665 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 PLCB4Q15147 1175 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 ADAM2Q99965 735 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 OSBPL3Q9H4L5 887 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 CWH43Q9H720 699 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 ERVK-5Q9HDB9 667 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 SORCS3Q9UPU3 1222 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 GINS2Q9Y248 185 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 NOC2LQ9Y3T9 749 aaKnown RBP12.01□□□□□ -0.49
VPS29-208ENST00000550267 KDM3AQ9Y4C1 1321 aa12.01□□□□□ -0.49
VPS29-208ENST00000550267 SMIM35A0A1B0GVV1 85 aa12□□□□□ -0.49
VPS29-208ENST00000550267 DENND3A2RUS2 1198 aa12□□□□□ -0.49
VPS29-208ENST00000550267 C2CD4DB7Z1M9 353 aa12□□□□□ -0.49
VPS29-208ENST00000550267 C9IYK1 514 aa12□□□□□ -0.49
VPS29-208ENST00000550267 RPS6KA5O75582 802 aa12□□□□□ -0.49
VPS29-208ENST00000550267 FGFR1P11362 822 aa12□□□□□ -0.49
VPS29-208ENST00000550267 CLCN1P35523 988 aa12□□□□□ -0.49
VPS29-208ENST00000550267 GUCA2AQ02747 115 aa12□□□□□ -0.49
VPS29-208ENST00000550267 MTMR3Q13615 1198 aa12□□□□□ -0.49
VPS29-208ENST00000550267 UBE2SQ16763 222 aa12□□□□□ -0.49
VPS29-208ENST00000550267 MTHFD1LQ6UB35 978 aa12□□□□□ -0.49
VPS29-208ENST00000550267 FRMD5Q7Z6J6 570 aa12□□□□□ -0.49
VPS29-208ENST00000550267 CATIPQ7Z7H3 387 aa12□□□□□ -0.49
VPS29-208ENST00000550267 UBALD2Q8IYN6 164 aa12□□□□□ -0.49
VPS29-208ENST00000550267 RASGRP4Q8TDF6 673 aa12□□□□□ -0.49
VPS29-208ENST00000550267 TMEM40Q8WWA1 233 aa12□□□□□ -0.49
VPS29-208ENST00000550267 MRPS27Q92552 414 aaKnown RBP12□□□□□ -0.49
VPS29-208ENST00000550267 RRP36Q96EU6 259 aaKnown RBP12□□□□□ -0.49
VPS29-208ENST00000550267 TCF25Q9BQ70 676 aa12□□□□□ -0.49
VPS29-208ENST00000550267 SPZ1Q9BXG8 430 aa12□□□□□ -0.49
VPS29-208ENST00000550267 POMKQ9H5K3 350 aa12□□□□□ -0.49
VPS29-208ENST00000550267 AZI2Q9H6S1 392 aa12□□□□□ -0.49
VPS29-208ENST00000550267 JPH1Q9HDC5 661 aaPredicted RBP12□□□□□ -0.49
VPS29-208ENST00000550267 JADE2Q9NQC1 790 aa12□□□□□ -0.49
VPS29-208ENST00000550267 ENTPD7Q9NQZ7 604 aa12□□□□□ -0.49
VPS29-208ENST00000550267 RGS18Q9NS28 235 aa12□□□□□ -0.49
VPS29-208ENST00000550267 FAM217BQ9NTX9 383 aaPredicted RBP12□□□□□ -0.49
VPS29-208ENST00000550267 SLC9A2Q9UBY0 812 aa12□□□□□ -0.49
VPS29-208ENST00000550267 LZTS1Q9Y250 596 aa12□□□□□ -0.49
VPS29-208ENST00000550267 NR2E1Q9Y466 385 aa12□□□□□ -0.49
VPS29-208ENST00000550267 TAF6LQ9Y6J9 622 aa12□□□□□ -0.49
VPS29-208ENST00000550267 CFAP54Q96N23 3096 aa12□□□□□ -0.49
VPS29-208ENST00000550267 DMDP11532 3685 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 CYP21A2P08686 494 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 HOXB8P17481 243 aaPredicted RBP11.99□□□□□ -0.49
VPS29-208ENST00000550267 LAG3P18627 525 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 PLCB3Q01970 1234 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 SLC24A5Q71RS6 500 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 RETREG3Q86VR2 466 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 CHD1LQ86WJ1 897 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 NME8Q8N427 588 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 TNPO1Q92973 898 aaKnown RBP11.99□□□□□ -0.49
VPS29-208ENST00000550267 MYL10Q9BUA6 226 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 ATP6V0A4Q9HBG4 840 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 C1orf112Q9NSG2 853 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 PUF60Q9UHX1 559 aaKnown RBP11.99□□□□□ -0.49
VPS29-208ENST00000550267 ST3GAL5Q9UNP4 418 aa11.99□□□□□ -0.49
VPS29-208ENST00000550267 KAT6AQ92794 2004 aa11.98□□□□□ -0.49
VPS29-208ENST00000550267 SIAH2O43255 324 aa11.98□□□□□ -0.49
VPS29-208ENST00000550267 PLEKHA8P1O95397 391 aa11.98□□□□□ -0.49
VPS29-208ENST00000550267 ASGR2P07307 311 aa11.98□□□□□ -0.49
VPS29-208ENST00000550267 WEE2P0C1S8 567 aa11.98□□□□□ -0.49
VPS29-208ENST00000550267 KLRC1P26715 233 aa11.98□□□□□ -0.49
VPS29-208ENST00000550267 PBX3P40426 434 aa11.98□□□□□ -0.49
VPS29-208ENST00000550267 ID4P47928 161 aa11.98□□□□□ -0.49
VPS29-208ENST00000550267 STAT5BP51692 787 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms