RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 RCOR1Q9UKL0 485 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 LTBP2Q14767 1821 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 KDM3AQ9Y4C1 1321 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 ZBBXA8MT70 800 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 ASAP2O43150 1006 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 SLC26A4O43511 780 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 USO1O60763 962 aaKnown RBP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 CUTAO60888 179 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 GPR32O75388 356 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 CXCL10P02778 98 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 SSBP05455 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 PFKMP08237 780 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 SRGAP2CP0DJJ0 459 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 DDIT3P35638 169 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 ME1P48163 572 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 CRYBB1P53674 252 aaPredicted RBP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 NFX1Q12986 1120 aaKnown RBP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 IKBKEQ14164 716 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 DHX8Q14562 1220 aaKnown RBP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 EMC2Q15006 297 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 KARSQ15046 597 aaKnown RBP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 HYIQ5T013 277 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 FAM102BQ5T8I3 360 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 PSRC1Q6PGN9 363 aaPredicted RBP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 KCNK18Q7Z418 384 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 KSR1Q8IVT5 923 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 TDHQ8IZJ6 230 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 LINC01465Q8N7H1 131 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 DBF4BQ8NFT6 615 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 KCNG4Q8TDN1 519 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 PRPF31Q8WWY3 499 aaKnown RBP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 NLRP7Q8WX94 980 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 SEPT8Q92599 483 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 SYMPKQ92797 1274 aaKnown RBP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 SPATA32Q96LK8 384 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 SCLT1Q96NL6 688 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 OSMRQ99650 979 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 CCSER1Q9C0I3 900 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 TSPYL2Q9H2G4 693 aaPredicted RBP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 ATP6V0A4Q9HBG4 840 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 POLD4Q9HCU8 107 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 PCDHA7Q9UN72 937 aa10.68□□□□□ -0.7
RAB5B-205ENST00000549034 MORC2Q9Y6X9 1032 aaPredicted RBP10.68□□□□□ -0.7
RAB5B-205ENST00000549034 TNRC18O15417 2968 aaPredicted RBP10.67□□□□□ -0.7
RAB5B-205ENST00000549034 A0A087WZ62 844 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
RAB5B-205ENST00000549034 RPS6KA5O75582 802 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 PLA2G4BP0C869 781 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 CYP11B2P19099 503 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 TXLNAP40222 546 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 GPC3P51654 580 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 GSE1Q14687 1217 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 LPIN1Q14693 890 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 PLEKHG4Q58EX7 1191 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 FBXO47Q5MNV8 452 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 RRAGBQ5VZM2 374 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 CNKSR3Q6P9H4 555 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 ZNF710Q8N1W2 664 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 KCTD17Q8N5Z5 321 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 SYT2Q8N9I0 419 aaPredicted RBP10.67□□□□□ -0.7
RAB5B-205ENST00000549034 PSPC1Q8WXF1 523 aaKnown RBP10.67□□□□□ -0.7
RAB5B-205ENST00000549034 HERVK_113Q902F9 699 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 VWCEQ96DN2 955 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 RNPC3Q96LT9 517 aaKnown RBP10.67□□□□□ -0.7
RAB5B-205ENST00000549034 NLRP4Q96MN2 994 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 FDXACB1Q9BRP7 624 aaPredicted RBP10.67□□□□□ -0.7
RAB5B-205ENST00000549034 GCOM2Q9BZD3 368 aaPredicted RBP10.67□□□□□ -0.7
RAB5B-205ENST00000549034 MTIF3Q9H2K0 278 aaKnown RBP10.67□□□□□ -0.7
RAB5B-205ENST00000549034 ADAMTS10Q9H324 1103 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 PRO3102Q9H379 93 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 XPNPEP1Q9NQW7 623 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 NOC2LQ9Y3T9 749 aaKnown RBP10.67□□□□□ -0.7
RAB5B-205ENST00000549034 SQORQ9Y6N5 450 aa10.67□□□□□ -0.7
RAB5B-205ENST00000549034 ABHD14A-ACY1A0A1B0GW23 586 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 GPR182O15218 404 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 CSDE1O75534 798 aaKnown RBP10.66□□□□□ -0.7
RAB5B-205ENST00000549034 PLCG1P19174 1290 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 CD52P31358 61 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 LAMTOR4Q0VGL1 99 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 MCM6Q14566 821 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 MXD4Q14582 209 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-205ENST00000549034 TCTN1Q2MV58 587 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 TMEM119Q4V9L6 283 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 ODR4Q5SWX8 454 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 RINT1Q6NUQ1 792 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 TSHZ1Q6ZSZ6 1077 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 USP38Q8NB14 1042 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 MCPH1Q8NEM0 835 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 LEO1Q8WVC0 666 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-205ENST00000549034 IPO9Q96P70 1041 aaKnown RBP10.66□□□□□ -0.7
RAB5B-205ENST00000549034 IFIH1Q9BYX4 1025 aaKnown RBP10.66□□□□□ -0.7
RAB5B-205ENST00000549034 INO80BQ9C086 356 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-205ENST00000549034 SCAND2PQ9GZW5 306 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-205ENST00000549034 POLR3FQ9H1D9 316 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-205ENST00000549034 AGO3Q9H9G7 860 aaKnown RBP10.66□□□□□ -0.7
RAB5B-205ENST00000549034 GPRC5CQ9NQ84 441 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 FAM13BQ9NYF5 915 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 CHMP5Q9NZZ3 219 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms