RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 NUDT17P0C025 328 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 GCFC2P16383 781 aaKnown RBP14.89□□□□□ -0.03
HDAC7-228ENST00000548938 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
HDAC7-228ENST00000548938 SLC12A3P55017 1021 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 ZNF211Q13398 564 aaPredicted RBP14.89□□□□□ -0.03
HDAC7-228ENST00000548938 ACCSLQ4AC99 568 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 ASPRV1Q53RT3 343 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 TLDC1Q6P9B6 456 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 RNF25Q96BH1 459 aaPredicted RBP14.89□□□□□ -0.03
HDAC7-228ENST00000548938 FAM212AQ96EL1 285 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 RBM17Q96I25 401 aaKnown RBP14.89□□□□□ -0.03
HDAC7-228ENST00000548938 AZI2Q9H6S1 392 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 TTC7AQ9ULT0 858 aaPredicted RBP14.89□□□□□ -0.03
HDAC7-228ENST00000548938 TRAF3IP3Q9Y228 551 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 CDK5RAP2Q96SN8 1893 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 ATP8B3O60423 1300 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 KLRG2A4D1S0 409 aaPredicted RBP14.88□□□□□ -0.03
HDAC7-228ENST00000548938 PPP1R12BO60237 982 aaPredicted RBP14.88□□□□□ -0.03
HDAC7-228ENST00000548938 LDHCP07864 332 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 ABCB4P21439 1286 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 ANXA13P27216 316 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 HOXA10P31260 410 aaPredicted RBP14.88□□□□□ -0.03
HDAC7-228ENST00000548938 MMP13P45452 471 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 PMS2P54278 862 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 PLTPP55058 493 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 NPEPPSP55786 919 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 IFI35P80217 286 aaPredicted RBP14.88□□□□□ -0.03
HDAC7-228ENST00000548938 KLRC3Q07444 240 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 KNOP1Q1ED39 458 aaKnown RBP14.88□□□□□ -0.03
HDAC7-228ENST00000548938 GLYCTKQ8IVS8 523 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 SLC35G2Q8TBE7 412 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 CUL5Q93034 780 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 SLC35C1Q96A29 364 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 ERP44Q9BS26 406 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 PABPC3Q9H361 631 aaKnown RBP14.88□□□□□ -0.03
HDAC7-228ENST00000548938 SLC12A4Q9UP95 1085 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 SNX24Q9Y343 169 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 DAAM1Q9Y4D1 1078 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 GOLGB1Q14789 3259 aaKnown RBP14.88□□□□□ -0.03
HDAC7-228ENST00000548938 RPSAP08865 295 aaKnown RBP14.88□□□□□ -0.03
HDAC7-228ENST00000548938 CLNS1AP54105 237 aaKnown RBP14.88□□□□□ -0.03
HDAC7-228ENST00000548938 DENND2CQ68D51 928 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 TTBK2Q6IQ55 1244 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 ADGRF4Q8IZF3 695 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 KIRREL3Q8IZU9 778 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 ANKS4BQ8N8V4 417 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 FBXO25Q8TCJ0 367 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 TCP11Q8WWU5 503 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 BCAS3Q9H6U6 928 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 MTMR4Q9NYA4 1195 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 INTUQ9ULD6 942 aa14.88□□□□□ -0.03
HDAC7-228ENST00000548938 PNMA6FA0A0J9YX94 578 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 MEIS1O00470 390 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 EVI5O60447 810 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 PSMC6P62333 389 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 NBPF9Q3BBW0 867 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 SPDYCQ5MJ68 293 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 ZDHHC24Q6UX98 284 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 CCDC63Q8NA47 563 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 UHMK1Q8TAS1 419 aaKnown RBP14.87□□□□□ -0.03
HDAC7-228ENST00000548938 PGM2Q96G03 612 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 ELAC2Q9BQ52 826 aaKnown RBP14.87□□□□□ -0.03
HDAC7-228ENST00000548938 REEP2Q9BRK0 252 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 ARFGEF1Q9Y6D6 1849 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 NCANO14594 1321 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 PITPNM2Q9BZ72 1349 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 ASAP2O43150 1006 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 BBOX1O75936 387 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 NR3C1P04150 777 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 SLC16A2P36021 539 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 PABPC4Q13310 644 aaKnown RBP eCLIP14.87□□□□□ -0.031e-24■□□□□ 9
HDAC7-228ENST00000548938 GIT2Q14161 759 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 FAM133BQ5BKY9 247 aaKnown RBP14.87□□□□□ -0.03
HDAC7-228ENST00000548938 PPP1R18Q6NYC8 613 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 PIGWQ7Z7B1 504 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 JAMLQ86YT9 394 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 NLGN1Q8N2Q7 840 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 RFFLQ8WZ73 363 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 PRMT1Q99873 361 aaKnown RBP14.87□□□□□ -0.03
HDAC7-228ENST00000548938 ASTN1O14525 1302 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 RPTORQ8N122 1335 aa14.87□□□□□ -0.03
HDAC7-228ENST00000548938 RGS16O15492 202 aaPredicted RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 CLTAP09496 248 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 SNHG28P0DPA3 235 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 FERP16591 822 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 IFNAR2P48551 515 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 SLC29A2Q14542 456 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 ITIH4Q14624 930 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 AADACL2Q6P093 401 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 EP400NLQ6ZTU2 488 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 EPM2AIP1Q7L775 607 aaPredicted RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 TBC1D1Q86TI0 1168 aaPredicted RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 PNMA8AQ86V59 439 aaPredicted RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 BANK1Q8NDB2 785 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 SLC30A5Q8TAD4 765 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 ARHGEF26Q96DR7 871 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 STAMBPL1Q96FJ0 436 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 RSPH10B2B2RC85 870 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 USP17L15C9J2P7 530 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 USP17L13C9JLJ4 530 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms