RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TXLNBQ8N3L3 684 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 GLIS3Q8NEA6 775 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 TCP11Q8WWU5 503 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 BBXQ8WY36 941 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-215ENST00000547672 KCNN1Q92952 543 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 SMARCAD1Q9H4L7 1026 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 KMT5AQ9NQR1 393 aa14.75□□□□□ -0.05
PTCH1-215ENST00000547672 MYH11P35749 1972 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 TRPM7Q96QT4 1865 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 ASTN1O14525 1302 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 GTPBP10A4D1E9 387 aaKnown RBP14.74□□□□□ -0.05
PTCH1-215ENST00000547672 CCDC169A6NNP5 214 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 NKRFO15226 690 aaKnown RBP eCLIP14.74□□□□□ -0.05
PTCH1-215ENST00000547672 PPP1R37O75864 691 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 AFPP02771 609 aaKnown RBP14.74□□□□□ -0.05
PTCH1-215ENST00000547672 CCDC175P0C221 793 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 ADORA2AP29274 412 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 CASP5P51878 434 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 CDK17Q00537 523 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 SP4Q02446 784 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 ENPEPQ07075 957 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 SREBF2Q12772 1141 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 CEP135Q66GS9 1140 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 MAMDC4Q6UXC1 1216 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 CCDC60Q8IWA6 550 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-215ENST00000547672 FAM186BQ8IYM0 893 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 CCDC170Q8IYT3 715 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 DAW1Q8N136 415 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 VTI1AQ96AJ9 217 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 PRIMPOLQ96LW4 560 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 DNAJC7Q99615 494 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 MMRN2Q9H8L6 949 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 EFCC1Q9HA90 598 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 NMRK2Q9NPI5 230 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 PDLIM7Q9NR12 457 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 ABHD10Q9NUJ1 306 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 DMAC2Q9NW81 257 aa14.74□□□□□ -0.05
PTCH1-215ENST00000547672 MYH9P35579 1960 aaKnown RBP14.74□□□□□ -0.05
PTCH1-215ENST00000547672 ZNFX1Q9P2E3 1918 aaKnown RBP14.74□□□□□ -0.05
PTCH1-215ENST00000547672 GSTTP1A0A1W2PQM5 241 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 RBM47A0AV96 593 aaKnown RBP14.73□□□□□ -0.05
PTCH1-215ENST00000547672 TGFB1I1O43294 461 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 ZNF862O60290 1169 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 N4BP1O75113 896 aaKnown RBP14.73□□□□□ -0.05
PTCH1-215ENST00000547672 LGR5O75473 907 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 STBD1O95210 358 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 GH1P01241 217 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 HOXD13P35453 343 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 TCF7P36402 384 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-215ENST00000547672 NPEPPSP55786 919 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 PEX3P56589 373 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 KCNH2Q12809 1159 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 IQSEC1Q6DN90 963 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 CCDC62Q6P9F0 684 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 INTS8Q75QN2 995 aaKnown RBP14.73□□□□□ -0.05
PTCH1-215ENST00000547672 ARMCX2Q7L311 632 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 MAEAQ7L5Y9 396 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 CACNA2D4Q7Z3S7 1137 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 SYN2Q92777 582 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-215ENST00000547672 GLG1Q92896 1179 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 HHIPL1Q96JK4 782 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 SPATA33Q96N06 139 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 FIZ1Q96SL8 496 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 PORCNQ9H237 461 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 KIAA1586Q9HCI6 787 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 AGPAT3Q9NRZ7 376 aa14.73□□□□□ -0.05
PTCH1-215ENST00000547672 EMSYQ7Z589 1322 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 TTC26A0AVF1 554 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 EXOC3O60645 756 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 CYLC1P35663 651 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-215ENST00000547672 NPTX2P47972 431 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 FXR1P51114 621 aaKnown RBP eCLIP14.72□□□□□ -0.05
PTCH1-215ENST00000547672 KRT83P78385 493 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 STRN3Q13033 797 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 MKRN3Q13064 507 aaKnown RBP14.72□□□□□ -0.05
PTCH1-215ENST00000547672 GRB14Q14449 540 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 LY6KQ17RY6 165 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 ZC2HC1CQ53FD0 456 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-215ENST00000547672 BRDTQ58F21 947 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-215ENST00000547672 IER5Q5VY09 327 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 PLA2G4FQ68DD2 849 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 GBP6Q6ZN66 633 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 GPR142Q7Z601 462 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-215ENST00000547672 EMID1Q96A84 441 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-215ENST00000547672 EEF2KMTQ96G04 330 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 FGFBP2Q9BYJ0 223 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 ABHD16BQ9H3Z7 469 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 DHX33Q9H6R0 707 aaKnown RBP14.72□□□□□ -0.05
PTCH1-215ENST00000547672 ZFYVE28Q9HCC9 887 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 PLCB1Q9NQ66 1216 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 MYO6Q9UM54 1294 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 TBX20Q9UMR3 447 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 SIK3Q9Y2K2 1263 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 LCTP09848 1927 aa14.72□□□□□ -0.05
PTCH1-215ENST00000547672 P4HA2O15460 535 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 ASAP2O43150 1006 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 HBP1O60381 514 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 PEX10O60683 326 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 TNNT1P13805 278 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms