RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SERPING1P05155 500 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 PPP2R5CQ13362 524 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 TMEM132BQ14DG7 1078 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 IQCEQ6IPM2 695 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 ALKBH5Q6P6C2 394 aaKnown RBP13.88□□□□□ -0.19
SCAF11-209ENST00000547018 ELP3Q9H9T3 547 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 FOCADQ5VW36 1801 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 EMSYQ7Z589 1322 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 ARFGEF1Q9Y6D6 1849 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 TBC1D12O60347 775 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 OAS2P29728 719 aaKnown RBP13.88□□□□□ -0.19
SCAF11-209ENST00000547018 PLA2G4AP47712 749 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 RARRES1P49788 294 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 DRAP1Q14919 205 aaPredicted RBP13.88□□□□□ -0.19
SCAF11-209ENST00000547018 KLHDC7AQ5VTJ3 777 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 MCTP2Q6DN12 878 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 SCYL3Q8IZE3 742 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 EHBP1Q8NDI1 1231 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 TRIM58Q8NG06 486 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 RIN2Q8WYP3 895 aaPredicted RBP13.88□□□□□ -0.19
SCAF11-209ENST00000547018 PXMP2Q9NR77 195 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 BRCA2P51587 3418 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 ZSCAN5CA6NGD5 496 aaPredicted RBP13.88□□□□□ -0.19
SCAF11-209ENST00000547018 KCNK3O14649 394 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 TBC1D8O95759 1140 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 SMC1AQ14683 1233 aaKnown RBP13.88□□□□□ -0.19
SCAF11-209ENST00000547018 WHAMMP3Q1A5X7 153 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 EDRF1Q3B7T1 1238 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 EPC2Q52LR7 807 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 LPAR1Q92633 364 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 RNF181Q9P0P0 153 aa13.88□□□□□ -0.19
SCAF11-209ENST00000547018 GAP43P17677 238 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 SETQ01105 290 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-209ENST00000547018 FKBP1CQ5VVH2 108 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 TRAPPC11Q7Z392 1133 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 CBWD2Q8IUF1 395 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 CLMNQ96JQ2 1002 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 RABEP2Q9H5N1 569 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 PGK2P07205 417 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 FECHP22830 423 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 AMPD2Q01433 879 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 MYL7Q01449 175 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 DNAJC21Q5F1R6 531 aaKnown RBP13.87□□□□□ -0.19
SCAF11-209ENST00000547018 TREML2Q5T2D2 321 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 LRRC1Q9BTT6 524 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 PI4K2AQ9BTU6 479 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 AP1M1Q9BXS5 423 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 FAM184BQ9ULE4 1060 aa13.87□□□□□ -0.19
SCAF11-209ENST00000547018 A0A1W2PQJ5 194 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 DENND3A2RUS2 1198 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 DHX15O43143 795 aaKnown RBP13.86□□□□□ -0.19
SCAF11-209ENST00000547018 CEP104O60308 925 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 PAFAH1B1P43034 410 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 C2CD6Q53TS8 623 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 STXBP4Q6ZWJ1 553 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 OSBPL9Q96SU4 736 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 MYO1AQ9UBC5 1043 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 PGAP2Q9UHJ9 254 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 TRAF3IP3Q9Y228 551 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 FRMD3A2A2Y4 597 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 HNRNPDLO14979 420 aaKnown RBP13.86□□□□□ -0.19
SCAF11-209ENST00000547018 EVI5O60447 810 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 STAT1P42224 750 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 FMO5P49326 533 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 HSD17B4P51659 736 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 FRMD5Q7Z6J6 570 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 PPP1R13LQ8WUF5 828 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 A1CFQ9NQ94 594 aaKnown RBP13.86□□□□□ -0.19
SCAF11-209ENST00000547018 VPS18Q9P253 973 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 DMGDHQ9UI17 866 aaKnown RBP13.86□□□□□ -0.19
SCAF11-209ENST00000547018 ERLIN1O75477 346 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 MYBL2P10244 700 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 CDR2LQ86X02 465 aaPredicted RBP13.86□□□□□ -0.19
SCAF11-209ENST00000547018 PALB2Q86YC2 1186 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 ZBTB10Q96DT7 871 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 TRIM31Q9BZY9 425 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 ANKFY1Q9P2R3 1169 aa13.86□□□□□ -0.19
SCAF11-209ENST00000547018 LRRIQ4A6NIV6 560 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 ANKRD63C9JTQ0 380 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 ATMINO43313 823 aaPredicted RBP13.85□□□□□ -0.19
SCAF11-209ENST00000547018 USP14P54578 494 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 FIGNQ5HY92 759 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 PPP4R3CPQ6ZMV5 832 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 EPM2AIP1Q7L775 607 aaPredicted RBP13.85□□□□□ -0.19
SCAF11-209ENST00000547018 BBXQ8WY36 941 aaPredicted RBP13.85□□□□□ -0.19
SCAF11-209ENST00000547018 TAF4BQ92750 862 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 RIT2Q99578 217 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 GANQ9H2C0 597 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 LUC7LQ9NQ29 371 aaKnown RBP13.85□□□□□ -0.19
SCAF11-209ENST00000547018 KMT5AQ9NQR1 393 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 JRKLQ9Y4A0 524 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 FOXN3O00409 490 aaPredicted RBP13.85□□□□□ -0.19
SCAF11-209ENST00000547018 SLC18A3Q16572 532 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 DAAM2Q86T65 1068 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 SULF1Q8IWU6 871 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 DHX37Q8IY37 1157 aaKnown RBP13.85□□□□□ -0.19
SCAF11-209ENST00000547018 ZBED3Q96IU2 234 aaPredicted RBP13.85□□□□□ -0.19
SCAF11-209ENST00000547018 TCHPQ9BT92 498 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms