RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PSPC1Q8WXF1 523 aaKnown RBP16.1■□□□□ 0.17
DDX54-203ENST00000546869 CDK5RAP3Q96JB5 506 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 RNPC3Q96LT9 517 aaKnown RBP16.1■□□□□ 0.17
DDX54-203ENST00000546869 FTHL17Q9BXU8 183 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 IFIH1Q9BYX4 1025 aaKnown RBP16.1■□□□□ 0.17
DDX54-203ENST00000546869 OSBPL7Q9BZF2 842 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 INO80BQ9C086 356 aaPredicted RBP16.1■□□□□ 0.17
DDX54-203ENST00000546869 BHMT2Q9H2M3 363 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 CDHR5Q9HBB8 845 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 KCND2Q9NZV8 630 aa16.1■□□□□ 0.17
DDX54-203ENST00000546869 DAXXQ9UER7 740 aaPredicted RBP16.1■□□□□ 0.17
DDX54-203ENST00000546869 GPR182O15218 404 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 CUTAO60888 179 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 GHRP10912 638 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 DARSP14868 501 aaKnown RBP16.09■□□□□ 0.17
DDX54-203ENST00000546869 KRT85P78386 507 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 PCBP1Q15365 356 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDX54-203ENST00000546869 KCNK18Q7Z418 384 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 RHPN2Q8IUC4 686 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 SYT2Q8N9I0 419 aaPredicted RBP16.09■□□□□ 0.17
DDX54-203ENST00000546869 TMEM40Q8WWA1 233 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 TMEM143Q96AN5 459 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 EPSTI1Q96J88 318 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 CLIC6Q96NY7 704 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 TIPINQ9BVW5 301 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 GCOM2Q9BZD3 368 aaPredicted RBP16.09■□□□□ 0.17
DDX54-203ENST00000546869 AGO3Q9H9G7 860 aaKnown RBP16.09■□□□□ 0.17
DDX54-203ENST00000546869 CCDC39Q9UFE4 941 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 PADI3Q9ULW8 664 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 COL4A3BPQ9Y5P4 624 aa16.09■□□□□ 0.17
DDX54-203ENST00000546869 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.08■□□□□ 0.16
DDX54-203ENST00000546869 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.08■□□□□ 0.16
DDX54-203ENST00000546869 RPS6KA5O75582 802 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 TXLNAP40222 546 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 LAMTOR4Q0VGL1 99 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 TCTN1Q2MV58 587 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 AXDND1Q5T1B0 1012 aaPredicted RBP16.08■□□□□ 0.16
DDX54-203ENST00000546869 RINT1Q6NUQ1 792 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 C1orf186Q6ZWK4 172 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 IFNLR1Q8IU57 520 aaPredicted RBP16.08■□□□□ 0.16
DDX54-203ENST00000546869 SYMPKQ92797 1274 aaKnown RBP16.08■□□□□ 0.16
DDX54-203ENST00000546869 OSMRQ99650 979 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 NFKBIZQ9BYH8 718 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
DDX54-203ENST00000546869 IFT122Q9HBG6 1241 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 ERVK-5Q9HDB9 667 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 CXXC1Q9P0U4 656 aaPredicted RBP16.08■□□□□ 0.16
DDX54-203ENST00000546869 NOC2LQ9Y3T9 749 aaKnown RBP16.08■□□□□ 0.16
DDX54-203ENST00000546869 SLC4A7Q9Y6M7 1214 aa16.08■□□□□ 0.16
DDX54-203ENST00000546869 USO1O60763 962 aaKnown RBP16.07■□□□□ 0.16
DDX54-203ENST00000546869 GUCY2CP25092 1073 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 CD52P31358 61 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 SLC12A3P55017 1021 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 SMAD3P84022 425 aaKnown RBP16.07■□□□□ 0.16
DDX54-203ENST00000546869 PAK2Q13177 524 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 KARSQ15046 597 aaKnown RBP16.07■□□□□ 0.16
DDX54-203ENST00000546869 USP49Q70CQ1 688 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 SRGAP1Q7Z6B7 1085 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 NLRP7Q8WX94 980 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 SLC9A7Q96T83 725 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 BLOC1S4Q9NUP1 217 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 STK17AQ9UEE5 414 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 PCDHA7Q9UN72 937 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 GINS2Q9Y248 185 aa16.07■□□□□ 0.16
DDX54-203ENST00000546869 SCN5AQ14524 2016 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 A0A087WZ62 844 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 ENPP3O14638 875 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 PLA2G4BP0C869 781 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 PLCG1P19174 1290 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 WDR5P61964 334 aaKnown RBP16.06■□□□□ 0.16
DDX54-203ENST00000546869 TFDP1Q14186 410 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 ZRSR1Q15695 479 aaKnown RBP16.06■□□□□ 0.16
DDX54-203ENST00000546869 FOXD4L6Q3SYB3 417 aaPredicted RBP16.06■□□□□ 0.16
DDX54-203ENST00000546869 SPECC1Q5M775 1068 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 FOXD4L3Q6VB84 417 aaPredicted RBP16.06■□□□□ 0.16
DDX54-203ENST00000546869 FAM228AQ86W67 206 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 LEO1Q8WVC0 666 aaPredicted RBP16.06■□□□□ 0.16
DDX54-203ENST00000546869 KIFAP3Q92845 792 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 FDXACB1Q9BRP7 624 aaPredicted RBP16.06■□□□□ 0.16
DDX54-203ENST00000546869 C17orf75Q9HAS0 396 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 CHST12Q9NRB3 414 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 KCNG1Q9UIX4 513 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 ST3GAL5Q9UNP4 418 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 EVPLQ92817 2033 aa16.06■□□□□ 0.16
DDX54-203ENST00000546869 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.05■□□□□ 0.16
DDX54-203ENST00000546869 ZBBXA8MT70 800 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 GLRA2P23416 452 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 KCNJ6P48051 423 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 ME1P48163 572 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 PTENP60484 403 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 FAM102BQ5T8I3 360 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 ADALQ6DHV7 355 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 GPR153Q6NV75 609 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 CCDC73Q6ZRK6 1079 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 KSR1Q8IVT5 923 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 ASAP3Q8TDY4 903 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 RAD54LQ92698 747 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 SPATA32Q96LK8 384 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 POLR3FQ9H1D9 316 aaPredicted RBP16.05■□□□□ 0.16
DDX54-203ENST00000546869 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms