RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 NAALADL2Q58DX5 795 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 RRAGBQ5VZM2 374 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 C16orf59Q7L2K0 433 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 ZNF710Q8N1W2 664 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 TCP11Q8WWU5 503 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 PRPF31Q8WWY3 499 aaKnown RBP23.1■■□□□ 1.29
SCARB1-211ENST00000546215 RAD54LQ92698 747 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 PPP1R16BQ96T49 567 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 ADAMTS10Q9H324 1103 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 IL23AQ9NPF7 189 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 GPC3P51654 580 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 RINT1Q6NUQ1 792 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 CCDC73Q6ZRK6 1079 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 C1orf186Q6ZWK4 172 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 DEFB128Q7Z7B8 93 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 MCPH1Q8NEM0 835 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 PSPC1Q8WXF1 523 aaKnown RBP23.1■■□□□ 1.29
SCARB1-211ENST00000546215 RUSC1Q9BVN2 902 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 ACRP10323 421 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 CMA1P23946 247 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 ARL2P36404 184 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 CDC42EP1Q00587 391 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 FBXO47Q5MNV8 452 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 MAEAQ7L5Y9 396 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 RHPN2Q8IUC4 686 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 KSR1Q8IVT5 923 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 RPUSD2Q8IZ73 545 aaKnown RBP23.09■■□□□ 1.29
SCARB1-211ENST00000546215 PDILTQ8N807 584 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 LARP4BQ92615 738 aaKnown RBP23.09■■□□□ 1.29
SCARB1-211ENST00000546215 GPRC5CQ9NQ84 441 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 STK17AQ9UEE5 414 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 GINS2Q9Y248 185 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 COL4A3BPQ9Y5P4 624 aa23.09■■□□□ 1.29
SCARB1-211ENST00000546215 SSBP05455 408 aaKnown RBP eCLIP23.08■■□□□ 1.29
SCARB1-211ENST00000546215 CRYBB1P53674 252 aaPredicted RBP23.08■■□□□ 1.29
SCARB1-211ENST00000546215 MCM6Q14566 821 aa23.08■■□□□ 1.29
SCARB1-211ENST00000546215 PRPF38BQ5VTL8 546 aaKnown RBP23.08■■□□□ 1.29
SCARB1-211ENST00000546215 ZNF668Q96K58 619 aaPredicted RBP23.08■■□□□ 1.29
SCARB1-211ENST00000546215 OSMRQ99650 979 aa23.08■■□□□ 1.29
SCARB1-211ENST00000546215 SQORQ9Y6N5 450 aa23.08■■□□□ 1.29
SCARB1-211ENST00000546215 ASAP2O43150 1006 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 PFKMP08237 780 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 GHRP10912 638 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 BMP8BP34820 402 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 LAMTOR4Q0VGL1 99 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 LPIN1Q14693 890 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 E2F4Q16254 413 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 ARSHQ5FYA8 562 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 TMEM40Q8WWA1 233 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 POLR3FQ9H1D9 316 aaPredicted RBP23.07■■□□□ 1.28
SCARB1-211ENST00000546215 PRO3102Q9H379 93 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 FAM13BQ9NYF5 915 aa23.07■■□□□ 1.28
SCARB1-211ENST00000546215 STAT6P42226 847 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 MXD4Q14582 209 aaPredicted RBP23.06■■□□□ 1.28
SCARB1-211ENST00000546215 PLEKHG4Q58EX7 1191 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 TMEM240Q5SV17 173 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 FAM102BQ5T8I3 360 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 ASAP3Q8TDY4 903 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 NLRP7Q8WX94 980 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 UBE2OQ9C0C9 1292 aaKnown RBP23.06■■□□□ 1.28
SCARB1-211ENST00000546215 AGO3Q9H9G7 860 aaKnown RBP23.06■■□□□ 1.28
SCARB1-211ENST00000546215 POLD4Q9HCU8 107 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 KCND2Q9NZV8 630 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 A0A087WZ62 844 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 A0A1W2PQ27 194 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 A0A1W2PQ64 194 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 A0A1W2PQD8 194 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 GLRA2P23416 452 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 GUCY2CP25092 1073 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 DHX8Q14562 1220 aaKnown RBP23.06■■□□□ 1.28
SCARB1-211ENST00000546215 CHRDL2Q6WN34 429 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 TSHZ1Q6ZSZ6 1077 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 ZNF365Q70YC5 407 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 ZNF410Q86VK4 478 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 USP38Q8NB14 1042 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 NLRP4Q96MN2 994 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.06■■□□□ 1.283e-8■■■□□ 15.6
SCARB1-211ENST00000546215 FDXACB1Q9BRP7 624 aaPredicted RBP23.06■■□□□ 1.28
SCARB1-211ENST00000546215 KCNH3Q9ULD8 1083 aa23.06■■□□□ 1.28
SCARB1-211ENST00000546215 A0A1B0GVL5 298 aa23.05■■□□□ 1.28
SCARB1-211ENST00000546215 POLR2DO15514 142 aaKnown RBP23.05■■□□□ 1.28
SCARB1-211ENST00000546215 SRGAP2CP0DJJ0 459 aa23.05■■□□□ 1.28
SCARB1-211ENST00000546215 EIF4BP23588 611 aaKnown RBP23.05■■□□□ 1.28
SCARB1-211ENST00000546215 TCTN1Q2MV58 587 aa23.05■■□□□ 1.28
SCARB1-211ENST00000546215 PSRC1Q6PGN9 363 aaPredicted RBP23.05■■□□□ 1.28
SCARB1-211ENST00000546215 GPBP1Q86WP2 473 aa23.05■■□□□ 1.28
SCARB1-211ENST00000546215 DAW1Q8N136 415 aa23.05■■□□□ 1.28
SCARB1-211ENST00000546215 DBF4BQ8NFT6 615 aa23.05■■□□□ 1.28
SCARB1-211ENST00000546215 IFT122Q9HBG6 1241 aa23.05■■□□□ 1.28
SCARB1-211ENST00000546215 HPSEQ9Y251 543 aa23.05■■□□□ 1.28
SCARB1-211ENST00000546215 NOC2LQ9Y3T9 749 aaKnown RBP23.05■■□□□ 1.28
SCARB1-211ENST00000546215 FAM237AA0A1B0GTK4 181 aa23.04■■□□□ 1.28
SCARB1-211ENST00000546215 DARSP14868 501 aaKnown RBP23.04■■□□□ 1.28
SCARB1-211ENST00000546215 PFKFB1P16118 471 aa23.04■■□□□ 1.28
SCARB1-211ENST00000546215 MAPK7Q13164 816 aa23.04■■□□□ 1.28
SCARB1-211ENST00000546215 IQUBQ8NA54 791 aa23.04■■□□□ 1.28
SCARB1-211ENST00000546215 RNF149Q8NC42 400 aa23.04■■□□□ 1.28
SCARB1-211ENST00000546215 KIFAP3Q92845 792 aa23.04■■□□□ 1.28
SCARB1-211ENST00000546215 DHX58Q96C10 678 aa23.04■■□□□ 1.28
SCARB1-211ENST00000546215 SCLT1Q96NL6 688 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms