RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 FBXO47Q5MNV8 452 aa22.77■■□□□ 1.24
HMGA2-211ENST00000545998 CHRDL2Q6WN34 429 aa22.77■■□□□ 1.24
HMGA2-211ENST00000545998 TCP11Q8WWU5 503 aa22.77■■□□□ 1.24
HMGA2-211ENST00000545998 PPP1R16BQ96T49 567 aa22.77■■□□□ 1.24
HMGA2-211ENST00000545998 UBE2OQ9C0C9 1292 aaKnown RBP22.77■■□□□ 1.24
HMGA2-211ENST00000545998 CDHR5Q9HBB8 845 aa22.77■■□□□ 1.24
HMGA2-211ENST00000545998 BLOC1S4Q9NUP1 217 aa22.77■■□□□ 1.24
HMGA2-211ENST00000545998 CCDC39Q9UFE4 941 aa22.77■■□□□ 1.24
HMGA2-211ENST00000545998 CYP11B2P19099 503 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 SLC12A3P55017 1021 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 NLRP11P59045 1033 aaKnown RBP22.76■■□□□ 1.23
HMGA2-211ENST00000545998 TMEM240Q5SV17 173 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 SYT2Q8N9I0 419 aaPredicted RBP22.76■■□□□ 1.23
HMGA2-211ENST00000545998 MCPH1Q8NEM0 835 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 PRPF31Q8WWY3 499 aaKnown RBP22.76■■□□□ 1.23
HMGA2-211ENST00000545998 PSPC1Q8WXF1 523 aaKnown RBP22.76■■□□□ 1.23
HMGA2-211ENST00000545998 GDPD2Q9HCC8 539 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 A0A087X0B3 334 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 PLA2G4BP0C869 781 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 CRYBB1P53674 252 aaPredicted RBP22.76■■□□□ 1.23
HMGA2-211ENST00000545998 CDC42EP1Q00587 391 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 LPIN1Q14693 890 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 RESP18Q5W5W9 173 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 RINT1Q6NUQ1 792 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 RHPN2Q8IUC4 686 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 RAD54LQ92698 747 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.76■■□□□ 1.23
HMGA2-211ENST00000545998 GINS2Q9Y248 185 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 COL4A3BPQ9Y5P4 624 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 SQORQ9Y6N5 450 aa22.76■■□□□ 1.23
HMGA2-211ENST00000545998 GHRP10912 638 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 ARL2P36404 184 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 NAALADL2Q58DX5 795 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 PLEKHG4Q58EX7 1191 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 PSRC1Q6PGN9 363 aaPredicted RBP22.75■■□□□ 1.23
HMGA2-211ENST00000545998 C1orf186Q6ZWK4 172 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 ZNF365Q70YC5 407 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 KSR1Q8IVT5 923 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 TMEM40Q8WWA1 233 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 OSMRQ99650 979 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 RUSC1Q9BVN2 902 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 GPRC5CQ9NQ84 441 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 TRIOBPQ9H2D6 2365 aa22.75■■□□□ 1.23
HMGA2-211ENST00000545998 LAMTOR4Q0VGL1 99 aa22.74■■□□□ 1.23
HMGA2-211ENST00000545998 RRAGBQ5VZM2 374 aa22.74■■□□□ 1.23
HMGA2-211ENST00000545998 ADALQ6DHV7 355 aa22.74■■□□□ 1.23
HMGA2-211ENST00000545998 TSHZ1Q6ZSZ6 1077 aa22.74■■□□□ 1.23
HMGA2-211ENST00000545998 MAEAQ7L5Y9 396 aa22.74■■□□□ 1.23
HMGA2-211ENST00000545998 USP38Q8NB14 1042 aa22.74■■□□□ 1.23
HMGA2-211ENST00000545998 NLRP7Q8WX94 980 aa22.74■■□□□ 1.23
HMGA2-211ENST00000545998 ZNF668Q96K58 619 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-211ENST00000545998 PANK2Q9BZ23 570 aa22.74■■□□□ 1.23
HMGA2-211ENST00000545998 STK17AQ9UEE5 414 aa22.74■■□□□ 1.23
HMGA2-211ENST00000545998 MYH11P35749 1972 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 ASAP2O43150 1006 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 SSBP05455 408 aaKnown RBP eCLIP22.73■■□□□ 1.23
HMGA2-211ENST00000545998 MCM6Q14566 821 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 MXD4Q14582 209 aaPredicted RBP22.73■■□□□ 1.23
HMGA2-211ENST00000545998 TCTN1Q2MV58 587 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 C9orf50Q5SZB4 431 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 FAM102BQ5T8I3 360 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 CNKSR3Q6P9H4 555 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 CCDC73Q6ZRK6 1079 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 ZNF410Q86VK4 478 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 ASAP3Q8TDY4 903 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 LARP4BQ92615 738 aaKnown RBP22.73■■□□□ 1.23
HMGA2-211ENST00000545998 POLR3FQ9H1D9 316 aaPredicted RBP22.73■■□□□ 1.23
HMGA2-211ENST00000545998 AGO3Q9H9G7 860 aaKnown RBP22.73■■□□□ 1.23
HMGA2-211ENST00000545998 MICAL3Q7RTP6 2002 aa22.73■■□□□ 1.23
HMGA2-211ENST00000545998 A0A087WZ62 844 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 FGBP02675 491 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 SHHQ15465 462 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 PDILTQ8N807 584 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 DBF4BQ8NFT6 615 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 NLRP4Q96MN2 994 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 FDXACB1Q9BRP7 624 aaPredicted RBP22.72■■□□□ 1.23
HMGA2-211ENST00000545998 IFIH1Q9BYX4 1025 aaKnown RBP22.72■■□□□ 1.23
HMGA2-211ENST00000545998 KCND2Q9NZV8 630 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 COLQQ9Y215 455 aaPredicted RBP22.72■■□□□ 1.23
HMGA2-211ENST00000545998 NOC2LQ9Y3T9 749 aaKnown RBP22.72■■□□□ 1.23
HMGA2-211ENST00000545998 GLRA2P23416 452 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 CMA1P23946 247 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 CD52P31358 61 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 ARSHQ5FYA8 562 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 OTOP2Q7RTS6 562 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 SCLT1Q96NL6 688 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 IFT122Q9HBG6 1241 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 FAM13BQ9NYF5 915 aa22.72■■□□□ 1.23
HMGA2-211ENST00000545998 SRGAP2CP0DJJ0 459 aa22.71■■□□□ 1.23
HMGA2-211ENST00000545998 DARSP14868 501 aaKnown RBP22.71■■□□□ 1.23
HMGA2-211ENST00000545998 EIF4BP23588 611 aaKnown RBP22.71■■□□□ 1.23
HMGA2-211ENST00000545998 GUCY2CP25092 1073 aa22.71■■□□□ 1.23
HMGA2-211ENST00000545998 STAT6P42226 847 aa22.71■■□□□ 1.23
HMGA2-211ENST00000545998 E2F4Q16254 413 aa22.71■■□□□ 1.23
HMGA2-211ENST00000545998 DAW1Q8N136 415 aa22.71■■□□□ 1.23
HMGA2-211ENST00000545998 HERVK_113Q902F9 699 aa22.71■■□□□ 1.23
HMGA2-211ENST00000545998 SEPT8Q92599 483 aa22.71■■□□□ 1.23
HMGA2-211ENST00000545998 TIPINQ9BVW5 301 aa22.71■■□□□ 1.23
HMGA2-211ENST00000545998 GCOM2Q9BZD3 368 aaPredicted RBP22.71■■□□□ 1.23
HMGA2-211ENST00000545998 PADI3Q9ULW8 664 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms