RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 AHDC1Q5TGY3 1603 aaPredicted RBP16.35■□□□□ 0.21
USP28-214ENST00000545540 GCOM1H8Y6P7 765 aaPredicted RBP16.35■□□□□ 0.21
USP28-214ENST00000545540 MYZAPP0CAP1 466 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 GCLMP48507 274 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 PLTPP55058 493 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 MAGOHP61326 146 aaKnown RBP16.35■□□□□ 0.21
USP28-214ENST00000545540 KRT71Q3SY84 523 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 MAGOHBQ96A72 148 aaKnown RBP16.35■□□□□ 0.21
USP28-214ENST00000545540 PTPN22Q9Y2R2 807 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 SHBGP04278 402 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 SPRED3Q2MJR0 410 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 PHLDB3Q6NSJ2 640 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 OTUD6BQ8N6M0 293 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 ZNF473Q8WTR7 871 aaKnown RBP16.34■□□□□ 0.21
USP28-214ENST00000545540 CRYGNQ8WXF5 182 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 ALG3Q92685 438 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 KRT35Q92764 455 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 ISCUQ9H1K1 167 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 DNAJC5Q9H3Z4 198 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 CYP3A7-CYP3A51PA0A087WV96 503 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 PHF20L1A8MW92 1017 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 FOXO6A8MYZ6 492 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 F8VZ95 297 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 GAS7O60861 476 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 PPP1R37O75864 691 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 CYP3A7P24462 503 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 RPL13P26373 211 aaKnown RBP16.34■□□□□ 0.21
USP28-214ENST00000545540 FMO5P49326 533 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 ITGB3BPQ13352 177 aaPredicted RBP16.34■□□□□ 0.21
USP28-214ENST00000545540 C2CD6Q53TS8 623 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 EFCAB13Q8IY85 973 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 UBE2TQ9NPD8 197 aaPredicted RBP16.34■□□□□ 0.21
USP28-214ENST00000545540 TMEM59LQ9UK28 342 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 PITPNM2Q9BZ72 1349 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 ZMYM2Q9UBW7 1377 aa16.34■□□□□ 0.21
USP28-214ENST00000545540 SREBF1P36956 1147 aa16.33■□□□□ 0.21
USP28-214ENST00000545540 MDH1P40925 334 aaKnown RBP16.33■□□□□ 0.21
USP28-214ENST00000545540 NT5C2P49902 561 aa16.33■□□□□ 0.21
USP28-214ENST00000545540 NSMFQ6X4W1 530 aa16.33■□□□□ 0.21
USP28-214ENST00000545540 OTOP1Q7RTM1 612 aa16.33■□□□□ 0.21
USP28-214ENST00000545540 VPS36Q86VN1 386 aa16.33■□□□□ 0.21
USP28-214ENST00000545540 CCDC17Q96LX7 622 aa16.33■□□□□ 0.21
USP28-214ENST00000545540 TMX4Q9H1E5 349 aaPredicted RBP16.33■□□□□ 0.21
USP28-214ENST00000545540 DNAJC17Q9NVM6 304 aaKnown RBP16.33■□□□□ 0.21
USP28-214ENST00000545540 A0A087WUV0 522 aaPredicted RBP16.33■□□□□ 0.2
USP28-214ENST00000545540 IFFO1Q0D2I5 559 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 PTGISQ16647 500 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 NLRP14Q86W24 1093 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 RNF14Q9UBS8 474 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 AMFRQ9UKV5 643 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 USP20Q9Y2K6 914 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 ECE2O60344 883 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 TNFAIP3P21580 790 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 PSMC2P35998 433 aaKnown RBP16.33■□□□□ 0.2
USP28-214ENST00000545540 KCNJ1P48048 391 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 EPC2Q52LR7 807 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.2
USP28-214ENST00000545540 HHIPL2Q6UWX4 724 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 CPXCR1Q8N123 301 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 C18orf8Q96DM3 657 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 PARVGQ9HBI0 331 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 GPRC5CQ9NQ84 441 aa16.33■□□□□ 0.2
USP28-214ENST00000545540 ARFGEF1Q9Y6D6 1849 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 TCRBV7S2A1N4TA0A589 114 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 EYA4O95677 639 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 SSTR3P32745 418 aaPredicted RBP16.32■□□□□ 0.2
USP28-214ENST00000545540 SOX5P35711 763 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 JAM2P57087 298 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 MESDQ14696 234 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 COL23A1Q86Y22 540 aaPredicted RBP16.32■□□□□ 0.2
USP28-214ENST00000545540 MYCBPAPQ8TBZ2 947 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 WHAMMQ8TF30 809 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 CTNNBL1Q8WYA6 563 aaPredicted RBP16.32■□□□□ 0.2
USP28-214ENST00000545540 POP1Q99575 1024 aaKnown RBP16.32■□□□□ 0.2
USP28-214ENST00000545540 CCDC113Q9H0I3 377 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 PLCB1Q9NQ66 1216 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 NYAP2Q9P242 653 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 IGLV3-22A0A075B6J6 115 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 SKOR1P84550 965 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 PPP4R3CPQ6ZMV5 832 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 C1orf186Q6ZWK4 172 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 ARHGEF19Q8IW93 802 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 DCAF4Q8WV16 495 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 CCDC127Q96BQ5 260 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 HSD17B14Q9BPX1 270 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 CBWD1Q9BRT8 395 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 KIFC3Q9BVG8 833 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 EPN3Q9H201 632 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 TMBIM4Q9HC24 238 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
USP28-214ENST00000545540 COL24A1Q17RW2 1714 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 KIAA0754O94854 1291 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 CCDC38Q502W7 563 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 DAB2IPQ5VWQ8 1189 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 KDM7AQ6ZMT4 941 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 CCDC25Q86WR0 208 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 INTS2Q9H0H0 1204 aaKnown RBP16.32■□□□□ 0.2
USP28-214ENST00000545540 UNC45AQ9H3U1 944 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 AGPAT3Q9NRZ7 376 aa16.32■□□□□ 0.2
USP28-214ENST00000545540 CTTNBP2NLQ9P2B4 639 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms