RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 FGFBP2Q9BYJ0 223 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 UPF3AQ9H1J1 476 aaKnown RBP15.2■□□□□ 0.02
SCARB1-209ENST00000545305 FANCLQ9NW38 375 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 TRIM49BA6NDI0 452 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 CCDC169A6NNP5 214 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 FGFR1OPO95684 399 aaKnown RBP15.19■□□□□ 0.02
SCARB1-209ENST00000545305 F2P00734 622 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 C6orf222P0C671 652 aaPredicted RBP15.19■□□□□ 0.02
SCARB1-209ENST00000545305 CCND3P30281 292 aaPredicted RBP15.19■□□□□ 0.02
SCARB1-209ENST00000545305 ABCD1P33897 745 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 DNM2P50570 870 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 CASP5P51878 434 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 PPFIA1Q13136 1202 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 BMT2Q1RMZ1 405 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 CENPPQ6IPU0 288 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 TTI2Q6NXR4 508 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 FOXR2Q6PJQ5 311 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 PPP4R3CPQ6ZMV5 832 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 ZNF720Q7Z2F6 126 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 FAM114A1Q8IWE2 563 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 CSGALNACT2Q8N6G5 542 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 RETREG2Q8NC44 543 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 ANKRD20A12PQ8NF67 263 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 SPIRE2Q8WWL2 714 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 TMEM143Q96AN5 459 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 HVCN1Q96D96 273 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 RNPEPQ9H4A4 650 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 KMT5AQ9NQR1 393 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 WBP1LQ9NX94 342 aa15.19■□□□□ 0.02
SCARB1-209ENST00000545305 ZBTB42B2RXF5 422 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 MAGEB2O15479 319 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 CALUO43852 315 aaPredicted RBP15.18■□□□□ 0.02
SCARB1-209ENST00000545305 PRPF6O94906 941 aaKnown RBP15.18■□□□□ 0.02
SCARB1-209ENST00000545305 INHAP05111 366 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 INSRRP14616 1297 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 CDK11BP21127 795 aaKnown RBP15.18■□□□□ 0.02
SCARB1-209ENST00000545305 SCP2P22307 547 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 GRK4P32298 578 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 DEKP35659 375 aaKnown RBP15.18■□□□□ 0.02
SCARB1-209ENST00000545305 NCKAP1LP55160 1127 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 SOX10P56693 466 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 CHMP4BP1P59074 171 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 IGBP1P78318 339 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 BEX3Q00994 111 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 SPAG1Q07617 926 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 MFSD10Q14728 455 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 KNOP1Q1ED39 458 aaKnown RBP15.18■□□□□ 0.02
SCARB1-209ENST00000545305 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 IER5Q5VY09 327 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 ANKRD40Q6AI12 368 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 SARM1Q6SZW1 724 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 ZNF507Q8TCN5 953 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 MED15Q96RN5 788 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 FIZ1Q96SL8 496 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 TRIM5Q9C035 493 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 SEMA6BQ9H3T3 888 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 ST6GALNAC4Q9H4F1 302 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 THAP9Q9H5L6 903 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 XPNPEP3Q9NQH7 507 aa15.18■□□□□ 0.02
SCARB1-209ENST00000545305 MAGEC2Q9UBF1 373 aaPredicted RBP15.18■□□□□ 0.02
SCARB1-209ENST00000545305 RRN3P2A6NIE6 340 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 SLC16A4O15374 487 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 MSCO60682 206 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 C22orf31O95567 290 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 ARL2P36404 184 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 NAMPTP43490 491 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 NPTX2P47972 431 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 PSEN2P49810 448 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 PMS1P54277 932 aaKnown RBP15.17■□□□□ 0.02
SCARB1-209ENST00000545305 GRIK4Q16099 956 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 KIAA0753Q2KHM9 967 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 GNASQ5JWF2 1037 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 HS2ST1Q7LGA3 356 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 HAUS6Q7Z4H7 955 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 SYCP3Q8IZU3 236 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 DEPTORQ8TB45 409 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 TRAPPC12Q8WVT3 735 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 PSPC1Q8WXF1 523 aaKnown RBP15.17■□□□□ 0.02
SCARB1-209ENST00000545305 BSNDQ8WZ55 320 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 ACCSQ96QU6 501 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 DUSP9Q99956 384 aaKnown RBP15.17■□□□□ 0.02
SCARB1-209ENST00000545305 TMEM206Q9H813 350 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 SUGCTQ9HAC7 445 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 SAMSN1Q9NSI8 373 aaKnown RBP15.17■□□□□ 0.02
SCARB1-209ENST00000545305 TYW1Q9NV66 732 aaKnown RBP15.17■□□□□ 0.02
SCARB1-209ENST00000545305 DDX20Q9UHI6 824 aaKnown RBP15.17■□□□□ 0.02
SCARB1-209ENST00000545305 EXOC7Q9UPT5 735 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 PTCH2Q9Y6C5 1203 aa15.17■□□□□ 0.02
SCARB1-209ENST00000545305 IGKV6-21A0A0C4DH24 114 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 LRRIQ4A6NIV6 560 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 PDXKO00764 312 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 CBFA2T2O43439 604 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 PPP1R37O75864 691 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 PGK1P00558 417 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 SERPINC1P01008 464 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 TPM3P06753 285 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 SMIM10L2AP0DMW4 78 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 SMIM10L2BP0DMW5 78 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 ZNF18P17022 549 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 TMOD1P28289 359 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms