RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 NARSO43776 548 aaKnown RBP13.44□□□□□ -0.26
COPA-205ENST00000541366 DDAH1O94760 285 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 FGFR4P22455 802 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 SMARCA1P28370 1054 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 KIF5BP33176 963 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 CLCN3P51790 818 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 ATAT1Q5SQI0 421 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 ODR4Q5SWX8 454 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 SWSAP1Q6NVH7 229 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 PDXDC2PQ6P474 469 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 HEATR3Q7Z4Q2 680 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 KIAA2013Q8IYS2 634 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 ABI1Q8IZP0 508 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 SIX5Q8N196 739 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 VPS52Q8N1B4 723 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 DTWD2Q8NBA8 298 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 KCNG4Q8TDN1 519 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 CYP26B1Q9NR63 512 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 DENND4AQ7Z401 1863 aa13.44□□□□□ -0.26
COPA-205ENST00000541366 GPR179Q6PRD1 2367 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 SLC26A2P50443 739 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 BCAR1P56945 870 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 NLRP11P59045 1033 aaKnown RBP13.43□□□□□ -0.26
COPA-205ENST00000541366 CEP55Q53EZ4 464 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 ZNF484Q5JVG2 852 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 PLCD3Q8N3E9 789 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 SLC22A17Q8WUG5 538 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 RIN2Q8WYP3 895 aaPredicted RBP13.43□□□□□ -0.26
COPA-205ENST00000541366 LZTS2Q9BRK4 669 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 ZBP1Q9H171 429 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 ZNF302Q9NR11 478 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 USTQ9Y2C2 406 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 COL1A2P08123 1366 aa13.43□□□□□ -0.26
COPA-205ENST00000541366 C2orf16Q68DN1 1984 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 MEIS1O00470 390 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 DHX15O43143 795 aaKnown RBP13.42□□□□□ -0.26
COPA-205ENST00000541366 HOXA2O43364 376 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 CSDE1O75534 798 aaKnown RBP13.42□□□□□ -0.26
COPA-205ENST00000541366 KRT37O76014 449 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 GSPT1P15170 499 aaKnown RBP13.42□□□□□ -0.26
COPA-205ENST00000541366 LONRF3Q496Y0 759 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 WWC2Q6AWC2 1192 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 DGLUCYQ7Z3D6 616 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 CKAP2LQ8IYA6 745 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 LRRC71Q8N4P6 559 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 BCL7CQ8WUZ0 217 aaPredicted RBP13.42□□□□□ -0.26
COPA-205ENST00000541366 RSAD2Q8WXG1 361 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 ANO3Q9BYT9 981 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 ADAMTS10Q9H324 1103 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 DZANK1Q9NVP4 752 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 FBXL21Q9UKT6 434 aa13.42□□□□□ -0.26
COPA-205ENST00000541366 MYH9P35579 1960 aaKnown RBP13.41□□□□□ -0.26
COPA-205ENST00000541366 KRBA1A5PL33 1030 aa13.41□□□□□ -0.26
COPA-205ENST00000541366 SH2B2O14492 632 aaPredicted RBP13.41□□□□□ -0.26
COPA-205ENST00000541366 PRC1O43663 620 aa13.41□□□□□ -0.26
COPA-205ENST00000541366 ZC3H11AO75152 810 aaKnown RBP eCLIP13.41□□□□□ -0.26
COPA-205ENST00000541366 LMNAP02545 664 aaKnown RBP13.41□□□□□ -0.26
COPA-205ENST00000541366 ZSCAN20P17040 1043 aaPredicted RBP13.41□□□□□ -0.26
COPA-205ENST00000541366 ALDH7A1P49419 539 aaKnown RBP13.41□□□□□ -0.26
COPA-205ENST00000541366 GNAQP50148 359 aa13.41□□□□□ -0.26
COPA-205ENST00000541366 TDGQ13569 410 aa13.41□□□□□ -0.26
COPA-205ENST00000541366 ZNF598Q86UK7 904 aaKnown RBP13.41□□□□□ -0.26
COPA-205ENST00000541366 DCLK2Q8N568 766 aa13.41□□□□□ -0.26
COPA-205ENST00000541366 TMEM169Q96HH4 297 aa13.41□□□□□ -0.26
COPA-205ENST00000541366 RWDD1Q9H446 243 aaPredicted RBP13.41□□□□□ -0.26
COPA-205ENST00000541366 KCNK12Q9HB15 430 aa13.41□□□□□ -0.26
COPA-205ENST00000541366 DUSP12Q9UNI6 340 aa13.41□□□□□ -0.26
COPA-205ENST00000541366 AKT3Q9Y243 479 aa13.41□□□□□ -0.26
COPA-205ENST00000541366 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 STK25O00506 426 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 N4BP1O75113 896 aaKnown RBP13.4□□□□□ -0.26
COPA-205ENST00000541366 CFHP08603 1231 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 FAM43BQ6ZT52 329 aaPredicted RBP13.4□□□□□ -0.26
COPA-205ENST00000541366 TMTC3Q6ZXV5 915 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 GPR149Q86SP6 731 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 CABP7Q86V35 215 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 TMEM87AQ8NBN3 555 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 LPPQ93052 612 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 ACSF2Q96CM8 615 aaPredicted RBP13.4□□□□□ -0.26
COPA-205ENST00000541366 RTP3Q9BQQ7 232 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 RIC8AQ9NPQ8 531 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 CACNA1IQ9P0X4 2223 aa13.4□□□□□ -0.26
COPA-205ENST00000541366 ZFHX4Q86UP3 3567 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 A0A0U1RQF3 1178 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 MEIS3P2A8K0S8 358 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 ADAMTS3O15072 1205 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 B4GALT3O60512 393 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 MYBP10242 640 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 EIF4BP23588 611 aaKnown RBP13.39□□□□□ -0.27
COPA-205ENST00000541366 CHMLP26374 656 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 ZNF76P36508 570 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 NAPAP54920 295 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms