RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 FOSBP53539 338 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 RBM10P98175 930 aaKnown RBP16.29■□□□□ 0.2
MSRB3-209ENST00000540804 LRRC55Q6ZSA7 311 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 KRT25Q7Z3Z0 450 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 KSR1Q8IVT5 923 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 RNF169Q8NCN4 708 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 NLRP7Q8WX94 980 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 SCLT1Q96NL6 688 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 NIFKQ9BYG3 293 aaKnown RBP16.29■□□□□ 0.2
MSRB3-209ENST00000540804 ATP6V0A4Q9HBG4 840 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 C11orf16Q9NQ32 467 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 TMEM161AQ9NX61 479 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 WRAP73Q9P2S5 460 aaPredicted RBP16.29■□□□□ 0.2
MSRB3-209ENST00000540804 VAV3Q9UKW4 847 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 BDP1A6H8Y1 2624 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 KIAA1671Q9BY89 1806 aa16.29■□□□□ 0.2
MSRB3-209ENST00000540804 CCDC194A0A1B0GVG4 234 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 PER2O15055 1255 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 DARSP14868 501 aaKnown RBP16.28■□□□□ 0.2
MSRB3-209ENST00000540804 NRIP1P48552 1158 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 NPEPPSP55786 919 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 NR5A1Q13285 461 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 ADAM15Q13444 863 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 ME3Q16798 604 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 XKR3Q5GH77 459 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 ODR4Q5SWX8 454 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 GALNT17Q6IS24 598 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 MOXD1Q6UVY6 613 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 ANO5Q75V66 913 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 COLGALT1Q8NBJ5 622 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 RDM1Q8NG50 284 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 CASD1Q96PB1 797 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 LRFN3Q9BTN0 628 aa16.28■□□□□ 0.2
MSRB3-209ENST00000540804 ORC3Q9UBD5 711 aaPredicted RBP16.28■□□□□ 0.2
MSRB3-209ENST00000540804 STK36Q9NRP7 1315 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 A0A087WZ62 844 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 CCNT1O60563 726 aaKnown RBP16.27■□□□□ 0.2
MSRB3-209ENST00000540804 CDKL5O76039 1030 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 FGF18O76093 207 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 ERVFC1P60507 584 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 LONRF3Q496Y0 759 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 NAALADL2Q58DX5 795 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 CLLU1OSQ5K130 101 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 NEK8Q86SG6 692 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 ECHDC2Q86YB7 292 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 HAS1Q92839 578 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 FDXACB1Q9BRP7 624 aaPredicted RBP16.27■□□□□ 0.2
MSRB3-209ENST00000540804 C1QTNF1Q9BXJ1 281 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 ELAC1Q9H777 363 aaKnown RBP16.27■□□□□ 0.2
MSRB3-209ENST00000540804 KCNMB3Q9NPA1 279 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 BMP2KQ9NSY1 1161 aaPredicted RBP16.27■□□□□ 0.2
MSRB3-209ENST00000540804 CLEC1BQ9P126 229 aa16.27■□□□□ 0.2
MSRB3-209ENST00000540804 IGKV6-21A0A0C4DH24 114 aa16.26■□□□□ 0.19
MSRB3-209ENST00000540804 MBTPS2O43462 519 aa16.26■□□□□ 0.19
MSRB3-209ENST00000540804 JAK2O60674 1132 aa16.26■□□□□ 0.19
MSRB3-209ENST00000540804 GLP2RO95838 553 aa16.26■□□□□ 0.19
MSRB3-209ENST00000540804 ZSCAN20P17040 1043 aaPredicted RBP16.26■□□□□ 0.19
MSRB3-209ENST00000540804 ATF7P17544 494 aaPredicted RBP16.26■□□□□ 0.19
MSRB3-209ENST00000540804 ZP2Q05996 745 aa16.26■□□□□ 0.19
MSRB3-209ENST00000540804 PUS10Q3MIT2 529 aaKnown RBP16.26■□□□□ 0.19
MSRB3-209ENST00000540804 RHPN2Q8IUC4 686 aa16.26■□□□□ 0.19
MSRB3-209ENST00000540804 THNSL1Q8IYQ7 743 aa16.26■□□□□ 0.19
MSRB3-209ENST00000540804 MICAL1Q8TDZ2 1067 aa16.26■□□□□ 0.19
MSRB3-209ENST00000540804 RGL1Q9NZL6 768 aa16.26■□□□□ 0.19
MSRB3-209ENST00000540804 SUCLA2Q9P2R7 463 aaPredicted RBP16.26■□□□□ 0.19
MSRB3-209ENST00000540804 BARX2Q9UMQ3 279 aaPredicted RBP16.26■□□□□ 0.19
MSRB3-209ENST00000540804 PCDHB12Q9Y5F1 795 aa16.26■□□□□ 0.19
MSRB3-209ENST00000540804 EVPLQ92817 2033 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 PI4K2BG5E9Z4 385 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 WNT7AO00755 349 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 ZBTB39O15060 712 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 MAFO75444 373 aaPredicted RBP16.25■□□□□ 0.19
MSRB3-209ENST00000540804 NDUFV1P49821 464 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 ANAPC15P60006 121 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 PSMC5P62195 406 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 ST3GAL1Q11201 340 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 PPP2R5CQ13362 524 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 PPP4R3AQ6IN85 833 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 VN1R2Q8NFZ6 395 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 HELQQ8TDG4 1101 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 TNFRSF25Q93038 417 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 MSLNLQ96KJ4 702 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 TMEM117Q9H0C3 514 aa16.25■□□□□ 0.19
MSRB3-209ENST00000540804 NCK2O43639 380 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 QARSP47897 775 aaKnown RBP16.24■□□□□ 0.19
MSRB3-209ENST00000540804 CTTNQ14247 550 aaKnown RBP16.24■□□□□ 0.19
MSRB3-209ENST00000540804 TMEM31Q5JXX7 168 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 PLPP4Q5VZY2 271 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 NCAPH2Q6IBW4 605 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 ZNF598Q86UK7 904 aaKnown RBP16.24■□□□□ 0.19
MSRB3-209ENST00000540804 FAM177A1Q8N128 213 aaPredicted RBP16.24■□□□□ 0.19
MSRB3-209ENST00000540804 EFHBQ8N7U6 833 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 NSUN7Q8NE18 718 aaKnown RBP16.24■□□□□ 0.19
MSRB3-209ENST00000540804 LPPQ93052 612 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 GTF3C6Q969F1 213 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 DYDC2Q96IM9 177 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 NLRP4Q96MN2 994 aa16.24■□□□□ 0.19
MSRB3-209ENST00000540804 GCOM2Q9BZD3 368 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms