RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ACRP10323 421 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 ARL2P36404 184 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 STAT6P42226 847 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 SLC12A3P55017 1021 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 LAMTOR4Q0VGL1 99 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 MCM6Q14566 821 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 MXD4Q14582 209 aaPredicted RBP17.21■□□□□ 0.35
DDB1-218ENST00000540784 MBTPS1Q14703 1052 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 GPNMBQ14956 572 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 CSPP1Q1MSJ5 1256 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 TPRNQ4KMQ1 711 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 FAM102BQ5T8I3 360 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 RINT1Q6NUQ1 792 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 C1orf186Q6ZWK4 172 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 KSR1Q8IVT5 923 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 PDILTQ8N807 584 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 NLRP7Q8WX94 980 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 SCLT1Q96NL6 688 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 PPP1R16BQ96T49 567 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 ADAMTS10Q9H324 1103 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 BLOC1S4Q9NUP1 217 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 SQORQ9Y6N5 450 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 TNRC18O15417 2968 aaPredicted RBP17.21■□□□□ 0.35
DDB1-218ENST00000540784 CXCL10P02778 98 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 BMP8BP34820 402 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 GPC3P51654 580 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 EPHB4P54760 987 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 FBXO47Q5MNV8 452 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 SV2BQ7L1I2 683 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 C16orf59Q7L2K0 433 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 IQUBQ8NA54 791 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 SEPT8Q92599 483 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 LARP4BQ92615 738 aaKnown RBP17.2■□□□□ 0.34
DDB1-218ENST00000540784 ZNF668Q96K58 619 aaPredicted RBP17.2■□□□□ 0.34
DDB1-218ENST00000540784 GCOM2Q9BZD3 368 aaPredicted RBP17.2■□□□□ 0.34
DDB1-218ENST00000540784 POLR3FQ9H1D9 316 aaPredicted RBP17.2■□□□□ 0.34
DDB1-218ENST00000540784 KCND2Q9NZV8 630 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 KCNH3Q9ULD8 1083 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 COL4A3BPQ9Y5P4 624 aa17.2■□□□□ 0.34
DDB1-218ENST00000540784 A0A087WZ62 844 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 A0A087X0B3 334 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 A0A1W2PQ27 194 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 A0A1W2PQ64 194 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 A0A1W2PQD8 194 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 POLR2DO15514 142 aaKnown RBP17.19■□□□□ 0.34
DDB1-218ENST00000540784 GHRP10912 638 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 TFDP1Q14186 410 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 LPIN1Q14693 890 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 PRPF38BQ5VTL8 546 aaKnown RBP17.19■□□□□ 0.34
DDB1-218ENST00000540784 ZNF365Q70YC5 407 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 ZNF410Q86VK4 478 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 LRRC15Q8TF66 581 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 KIFAP3Q92845 792 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 NLRP4Q96MN2 994 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 OSMRQ99650 979 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 FDXACB1Q9BRP7 624 aaPredicted RBP17.19■□□□□ 0.34
DDB1-218ENST00000540784 PYM1Q9BRP8 204 aaKnown RBP17.19■□□□□ 0.34
DDB1-218ENST00000540784 RUSC1Q9BVN2 902 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 TIPINQ9BVW5 301 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 OSBPL7Q9BZF2 842 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 INO80BQ9C086 356 aaPredicted RBP17.19■□□□□ 0.34
DDB1-218ENST00000540784 POLD4Q9HCU8 107 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 GPRC5CQ9NQ84 441 aa17.19■□□□□ 0.34
DDB1-218ENST00000540784 A0A1B0GVL5 298 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 RPS6KA5O75582 802 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 KRT18P05783 430 aaKnown RBP17.18■□□□□ 0.34
DDB1-218ENST00000540784 ACTN1P12814 892 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 GLRA2P23416 452 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 EIF4BP23588 611 aaKnown RBP17.18■□□□□ 0.34
DDB1-218ENST00000540784 GUCY2CP25092 1073 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 NAALADL2Q58DX5 795 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 PLEKHG4Q58EX7 1191 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 ARSHQ5FYA8 562 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 TMEM240Q5SV17 173 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 ODR4Q5SWX8 454 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 PSRC1Q6PGN9 363 aaPredicted RBP17.18■□□□□ 0.34
DDB1-218ENST00000540784 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 TSHZ1Q6ZSZ6 1077 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 GPBP1Q86WP2 473 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 RNF149Q8NC42 400 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 DBF4BQ8NFT6 615 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 DHX58Q96C10 678 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 VWCEQ96DN2 955 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 IFT74Q96LB3 600 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 CUEDC2Q9H467 287 aa17.18■□□□□ 0.34
DDB1-218ENST00000540784 NOC2LQ9Y3T9 749 aaKnown RBP17.18■□□□□ 0.34
DDB1-218ENST00000540784 GPR182O15218 404 aa17.17■□□□□ 0.34
DDB1-218ENST00000540784 HIP1RO75146 1068 aa17.17■□□□□ 0.34
DDB1-218ENST00000540784 DARSP14868 501 aaKnown RBP17.17■□□□□ 0.34
DDB1-218ENST00000540784 POU5F1BQ06416 359 aa17.17■□□□□ 0.34
DDB1-218ENST00000540784 RAD51AP2Q09MP3 1159 aa17.17■□□□□ 0.34
DDB1-218ENST00000540784 NFX1Q12986 1120 aaKnown RBP17.17■□□□□ 0.34
DDB1-218ENST00000540784 IKBKEQ14164 716 aa17.17■□□□□ 0.34
DDB1-218ENST00000540784 CNKSR3Q6P9H4 555 aa17.17■□□□□ 0.34
DDB1-218ENST00000540784 OTOP2Q7RTS6 562 aa17.17■□□□□ 0.34
DDB1-218ENST00000540784 ASAP3Q8TDY4 903 aa17.17■□□□□ 0.34
DDB1-218ENST00000540784 DRC1Q96MC2 740 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms