RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 HOXB8P17481 243 aaPredicted RBP13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 GPC3P51654 580 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 JAK3P52333 1124 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 ZXDAP98168 799 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 KRT17Q04695 432 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 KCNT2Q6UVM3 1135 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 ECHDC2Q86YB7 292 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 RDM1Q8NG50 284 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 RSPH1Q8WYR4 309 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 PHKBQ93100 1093 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 ZNF558Q96NG5 402 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 TCF25Q9BQ70 676 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 C22orf23Q9BZE7 217 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 SH3GLB2Q9NR46 395 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 RNF19AQ9NV58 838 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 HCSTQ9UBK5 93 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 SNX14Q9Y5W7 946 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 FNDC1Q4ZHG4 1894 aaPredicted RBP13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 LOXHD1Q8IVV2 1947 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 A0A0U1RQF3 1178 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 TMEM221A6NGB7 291 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 M0R296 226 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 MSH4O15457 936 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 EDIL3O43854 480 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 GAS7O60861 476 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 EOMESO95936 686 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 DARSP14868 501 aaKnown RBP13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 RPS6KB1P23443 525 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 MRE11P49959 708 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 EVCP57679 992 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 CDC42EP1Q00587 391 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 PRKCEQ02156 737 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 ANKRD54Q6NXT1 300 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 LRRC55Q6ZSA7 311 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 SKAP1Q86WV1 359 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 LRRC71Q8N4P6 559 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 SLC5A5Q92911 643 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 PRRX2Q99811 253 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 TEKT3Q9BXF9 490 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 MRPL9Q9BYD2 267 aaKnown RBP13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 S1PR5Q9H228 398 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 ENTPD7Q9NQZ7 604 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 DACT1Q9NYF0 836 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 SPG21Q9NZD8 308 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 PLXNA4Q9HCM2 1894 aa13.55□□□□□ -0.24
CBX3P4-202ENST00000540428 CARNS1A5YM72 827 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 PSMA5P28066 241 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 SIGLEC14Q08ET2 396 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 TBC1D8BQ0IIM8 1120 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 TARBP2Q15633 366 aaKnown RBP13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 LRCH2Q5VUJ6 765 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 PLPP4Q5VZY2 271 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 ZNF598Q86UK7 904 aaKnown RBP13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 RPGRIP1Q96KN7 1286 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 TRAIPQ9BWF2 469 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 SLC26A6Q9BXS9 759 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 NIFKQ9BYG3 293 aaKnown RBP13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 CHST12Q9NRB3 414 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 VPS54Q9P1Q0 977 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 TECTAO75443 2155 aa13.54□□□□□ -0.24
CBX3P4-202ENST00000540428 ZNF318Q5VUA4 2279 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 PSMD10O75832 226 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 PDIA3P30101 505 aaKnown RBP13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 TECP42680 631 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 NLRP5P59047 1200 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 UGCGQ16739 394 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 Q4G0T1 1027 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 CLLU1OSQ5K130 101 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 SYCE2Q6PIF2 218 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 TMC7Q7Z402 723 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 SUGP1Q8IWZ8 645 aaKnown RBP13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 SLC39A11Q8N1S5 342 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 CASP10Q92851 521 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 SCLT1Q96NL6 688 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 GCOM2Q9BZD3 368 aaPredicted RBP13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 UNC45AQ9H3U1 944 aa13.53□□□□□ -0.24
CBX3P4-202ENST00000540428 EVPLQ92817 2033 aa13.52□□□□□ -0.24
CBX3P4-202ENST00000540428 CYP3A7-CYP3A51PA0A087WV96 503 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 IGKV6-21A0A0C4DH24 114 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 HIDE1A8MVS5 230 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 EPB41L2O43491 1005 aaKnown RBP13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 CHMP2AO43633 222 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 REC8O95072 547 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 CYP3A7P24462 503 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 PTPN5P54829 565 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 SMC1AQ14683 1233 aaKnown RBP13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 BMS1Q14692 1282 aaKnown RBP13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 PTPN21Q16825 1174 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 XKR3Q5GH77 459 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 MOXD1Q6UVY6 613 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 B3GNT9Q6UX72 402 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 MIER3Q7Z3K6 550 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 TRIM22Q8IYM9 498 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 FBXL6Q8N531 539 aa13.52□□□□□ -0.25
CBX3P4-202ENST00000540428 MRPL43Q8N983 215 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms