RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SUCLA2Q9P2R7 463 aaPredicted RBP16.85■□□□□ 0.29
UBE3B-212ENST00000540230 NLRC5Q86WI3 1866 aa16.85■□□□□ 0.29
UBE3B-212ENST00000540230 XIRP2A4UGR9 3374 aa16.84■□□□□ 0.29
UBE3B-212ENST00000540230 A0A087WZ62 844 aa16.84■□□□□ 0.29
UBE3B-212ENST00000540230 DARSP14868 501 aaKnown RBP16.84■□□□□ 0.29
UBE3B-212ENST00000540230 IBSPP21815 317 aaPredicted RBP16.84■□□□□ 0.29
UBE3B-212ENST00000540230 EIF4BP23588 611 aaKnown RBP16.84■□□□□ 0.29
UBE3B-212ENST00000540230 POLGP54098 1239 aaPredicted RBP16.84■□□□□ 0.29
UBE3B-212ENST00000540230 CATSPER3Q86XQ3 398 aa16.84■□□□□ 0.29
UBE3B-212ENST00000540230 RHPN2Q8IUC4 686 aa16.84■□□□□ 0.29
UBE3B-212ENST00000540230 NLRP7Q8WX94 980 aa16.84■□□□□ 0.29
UBE3B-212ENST00000540230 TMEM143Q96AN5 459 aa16.84■□□□□ 0.29
UBE3B-212ENST00000540230 ADAM2Q99965 735 aa16.84■□□□□ 0.29
UBE3B-212ENST00000540230 FDXACB1Q9BRP7 624 aaPredicted RBP16.84■□□□□ 0.29
UBE3B-212ENST00000540230 XPNPEP1Q9NQW7 623 aa16.84■□□□□ 0.29
UBE3B-212ENST00000540230 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.84■□□□□ 0.29
UBE3B-212ENST00000540230 VCANP13611 3396 aa16.84■□□□□ 0.29
UBE3B-212ENST00000540230 GPR182O15218 404 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 IGFBP4P22692 258 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 GATMP50440 423 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 DSC3Q14574 896 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 EMC2Q15006 297 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 IL17AQ16552 155 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 OTUD6AQ7L8S5 288 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 GDPD5Q8WTR4 605 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 SLC7A3Q8WY07 619 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 SCLT1Q96NL6 688 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
UBE3B-212ENST00000540230 K7ELQ4 463 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-212ENST00000540230 LPXNO60711 386 aa16.82■□□□□ 0.28
UBE3B-212ENST00000540230 DGKIO75912 1065 aa16.82■□□□□ 0.28
UBE3B-212ENST00000540230 LINC00271P0C7V0 271 aa16.82■□□□□ 0.28
UBE3B-212ENST00000540230 RARRES1P49788 294 aa16.82■□□□□ 0.28
UBE3B-212ENST00000540230 DNM2P50570 870 aa16.82■□□□□ 0.28
UBE3B-212ENST00000540230 FXR2P51116 673 aaKnown RBP eCLIP16.82■□□□□ 0.28
UBE3B-212ENST00000540230 ERVK-21P61565 698 aa16.82■□□□□ 0.28
UBE3B-212ENST00000540230 ECM1Q16610 540 aa16.82■□□□□ 0.28
UBE3B-212ENST00000540230 POTEGQ6S5H5 508 aa16.82■□□□□ 0.28
UBE3B-212ENST00000540230 ZNF689Q96CS4 500 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-212ENST00000540230 NLRP4Q96MN2 994 aa16.82■□□□□ 0.28
UBE3B-212ENST00000540230 TGS1Q96RS0 853 aaKnown RBP16.82■□□□□ 0.28
UBE3B-212ENST00000540230 PRRC2BQ5JSZ5 2229 aaKnown RBP16.82■□□□□ 0.28
UBE3B-212ENST00000540230 KIAA1671Q9BY89 1806 aa16.82■□□□□ 0.28
UBE3B-212ENST00000540230 ADGRA3Q8IWK6 1321 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 C9IYK1 514 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 RFC5P40937 340 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 GRB10Q13322 594 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 PRPF31Q8WWY3 499 aaKnown RBP16.81■□□□□ 0.28
UBE3B-212ENST00000540230 JPH2Q9BR39 696 aaPredicted RBP16.81■□□□□ 0.28
UBE3B-212ENST00000540230 IFT122Q9HBG6 1241 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 TUFT1Q9NNX1 390 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 RGS18Q9NS28 235 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 ANKEF1Q9NU02 776 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 PPME1Q9Y570 386 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 COL4A3BPQ9Y5P4 624 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 A0A0C4DFX4 3053 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 RALGAPA2Q2PPJ7 1873 aa16.81■□□□□ 0.28
UBE3B-212ENST00000540230 FNDC1Q4ZHG4 1894 aaPredicted RBP16.81■□□□□ 0.28
UBE3B-212ENST00000540230 DENND3A2RUS2 1198 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 PP2D1A8MPX8 630 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 RPA1P27694 616 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 SARSP49591 514 aaKnown RBP16.8■□□□□ 0.28
UBE3B-212ENST00000540230 RILPL1Q5EBL4 403 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 FERMT3Q86UX7 667 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 ZNF410Q86VK4 478 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 IGSF22Q8N9C0 903 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 PPM1EQ8WY54 764 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 MTRQ99707 1265 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 POLR3CQ9BUI4 534 aaPredicted RBP16.8■□□□□ 0.28
UBE3B-212ENST00000540230 GCOM2Q9BZD3 368 aaPredicted RBP16.8■□□□□ 0.28
UBE3B-212ENST00000540230 VPS37CA5D8V6 355 aaPredicted RBP16.8■□□□□ 0.28
UBE3B-212ENST00000540230 CDC25AP30304 524 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 ATP2C1P98194 919 aaPredicted RBP16.8■□□□□ 0.28
UBE3B-212ENST00000540230 LAMTOR4Q0VGL1 99 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 CCDC85BQ15834 202 aaPredicted RBP16.8■□□□□ 0.28
UBE3B-212ENST00000540230 PAN2Q504Q3 1202 aaKnown RBP16.8■□□□□ 0.28
UBE3B-212ENST00000540230 ODR4Q5SWX8 454 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 SLC24A5Q71RS6 500 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 ZNF710Q8N1W2 664 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 PSPC1Q8WXF1 523 aaKnown RBP16.8■□□□□ 0.28
UBE3B-212ENST00000540230 MINDY3Q9H8M7 445 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 LRWD1Q9UFC0 647 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 MTCH2Q9Y6C9 303 aa16.8■□□□□ 0.28
UBE3B-212ENST00000540230 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
UBE3B-212ENST00000540230 SRGAP2CP0DJJ0 459 aa16.79■□□□□ 0.28
UBE3B-212ENST00000540230 EPC2Q52LR7 807 aa16.79■□□□□ 0.28
UBE3B-212ENST00000540230 MICALL1Q8N3F8 863 aa16.79■□□□□ 0.28
UBE3B-212ENST00000540230 FIBCD1Q8N539 461 aa16.79■□□□□ 0.28
UBE3B-212ENST00000540230 ASAP3Q8TDY4 903 aa16.79■□□□□ 0.28
UBE3B-212ENST00000540230 INTS4Q96HW7 963 aaKnown RBP16.79■□□□□ 0.28
UBE3B-212ENST00000540230 PRDM6Q9NQX0 595 aa16.79■□□□□ 0.28
UBE3B-212ENST00000540230 C1orf112Q9NSG2 853 aa16.79■□□□□ 0.28
UBE3B-212ENST00000540230 GAS2O43903 313 aaKnown RBP16.78■□□□□ 0.28
UBE3B-212ENST00000540230 DGAT1O75907 488 aa16.78■□□□□ 0.28
UBE3B-212ENST00000540230 FGFR1P11362 822 aa16.78■□□□□ 0.28
UBE3B-212ENST00000540230 SYT1P21579 422 aa16.78■□□□□ 0.28
UBE3B-212ENST00000540230 CCT6AP40227 531 aaKnown RBP16.78■□□□□ 0.28
UBE3B-212ENST00000540230 PRPHP41219 470 aa16.78■□□□□ 0.28
UBE3B-212ENST00000540230 FAM189BP81408 668 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms