RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 CCDC60Q8IWA6 550 aaPredicted RBP18.8■□□□□ 0.6
LTBR-207ENST00000539925 AFAP1L1Q8TED9 768 aa18.8■□□□□ 0.6
LTBR-207ENST00000539925 SEPT1Q8WYJ6 367 aa18.8■□□□□ 0.6
LTBR-207ENST00000539925 IFT74Q96LB3 600 aa18.8■□□□□ 0.6
LTBR-207ENST00000539925 ZNF408Q9H9D4 720 aa18.8■□□□□ 0.6
LTBR-207ENST00000539925 FBXL5Q9UKA1 691 aa18.8■□□□□ 0.6
LTBR-207ENST00000539925 LCTP09848 1927 aa18.8■□□□□ 0.6
LTBR-207ENST00000539925 DYNC1I1O14576 645 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 KIF5CO60282 957 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 FARP2O94887 1054 aaPredicted RBP18.79■□□□□ 0.6
LTBR-207ENST00000539925 OATP04181 439 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 RFC5P40937 340 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 NPEPPSP55786 919 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 ARHGAP29Q52LW3 1261 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 GBP6Q6ZN66 633 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 BORCS6Q96GS4 357 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 MS4A4AQ96JQ5 239 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 NIFKQ9BYG3 293 aaKnown RBP18.79■□□□□ 0.6
LTBR-207ENST00000539925 PDLIM7Q9NR12 457 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 MORF4L1Q9UBU8 362 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 SEPT9Q9UHD8 586 aaPredicted RBP18.79■□□□□ 0.6
LTBR-207ENST00000539925 MYH11P35749 1972 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 UQCRHLA0A096LP55 91 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 CCL15-CCL14A0A0B4J2E2 113 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 EIF3CLB5ME19 914 aaKnown RBP18.79■□□□□ 0.6
LTBR-207ENST00000539925 PDHXO00330 501 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 CLIC2O15247 247 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 UQCRHP07919 91 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 PEX3P56589 373 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 KCNA1Q09470 495 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 KCNMA1Q12791 1236 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 CCL15Q16663 113 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 EXOC3L4Q17RC7 722 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 PLA2G4FQ68DD2 849 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 WDR59Q6PJI9 974 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 INTS8Q75QN2 995 aaKnown RBP18.79■□□□□ 0.6
LTBR-207ENST00000539925 EHBP1Q8NDI1 1231 aa18.79■□□□□ 0.6
LTBR-207ENST00000539925 EIF3CQ99613 913 aaKnown RBP18.79■□□□□ 0.6
LTBR-207ENST00000539925 SSU72P8A0A1W2PR75 194 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 EXOC3O60645 756 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 N4BP1O75113 896 aaKnown RBP18.78■□□□□ 0.6
LTBR-207ENST00000539925 KRT13P13646 458 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 KLK7P49862 253 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 SP2Q02086 613 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 ENPEPQ07075 957 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 TUBB2AQ13885 445 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 MTF1Q14872 753 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 Q3C1V9 767 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 PDXDC1Q6P996 788 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 TRIM65Q6PJ69 517 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 SYT10Q6XYQ8 523 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 MAEAQ7L5Y9 396 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 SLC35C1Q96A29 364 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 CCDC42Q96M95 316 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 PARK7Q99497 189 aaKnown RBP18.78■□□□□ 0.6
LTBR-207ENST00000539925 TUBB2BQ9BVA1 445 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 LSM14BQ9BX40 385 aaKnown RBP18.78■□□□□ 0.6
LTBR-207ENST00000539925 HAUS4Q9H6D7 363 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 AZI2Q9H6S1 392 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 MLXIPQ9HAP2 919 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 KMT5AQ9NQR1 393 aa18.78■□□□□ 0.6
LTBR-207ENST00000539925 GAS2O43903 313 aaKnown RBP18.77■□□□□ 0.6
LTBR-207ENST00000539925 NPTX2P47972 431 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 SLC26A2P50443 739 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 SPA17Q15506 151 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 TCERG1LQ5VWI1 586 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 RRAGAQ7L523 313 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 ZNF467Q7Z7K2 595 aaPredicted RBP18.77■□□□□ 0.6
LTBR-207ENST00000539925 USP37Q86T82 979 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 MAP4K3Q8IVH8 894 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 BAP1Q92560 729 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 DESI2Q9BSY9 194 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 TSGA10Q9BZW7 698 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 NHEJ1Q9H9Q4 299 aaPredicted RBP18.77■□□□□ 0.6
LTBR-207ENST00000539925 POLD4Q9HCU8 107 aa18.77■□□□□ 0.6
LTBR-207ENST00000539925 LUC7LQ9NQ29 371 aaKnown RBP18.77■□□□□ 0.6
LTBR-207ENST00000539925 CCDC169A6NNP5 214 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 BTBD19C9JJ37 291 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 RIOK3O14730 519 aaKnown RBP18.76■□□□□ 0.59
LTBR-207ENST00000539925 P4HA2O15460 535 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 ANXA13P27216 316 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 POLGP54098 1239 aaPredicted RBP18.76■□□□□ 0.59
LTBR-207ENST00000539925 SP4Q02446 784 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 CETN1Q12798 172 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 DCAF17Q5H9S7 520 aaPredicted RBP18.76■□□□□ 0.59
LTBR-207ENST00000539925 WDR78Q5VTH9 848 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 SPRYD7Q5W111 196 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 XXYLT1Q8NBI6 393 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 TMEM161BQ8NDZ6 487 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 SLC7A3Q8WY07 619 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 VTI1AQ96AJ9 217 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 CHP1Q99653 195 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 DDX41Q9UJV9 622 aaKnown RBP18.76■□□□□ 0.59
LTBR-207ENST00000539925 TBX20Q9UMR3 447 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 BZW2Q9Y6E2 419 aaKnown RBP18.76■□□□□ 0.59
LTBR-207ENST00000539925 IVNS1ABPQ9Y6Y0 642 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 KIAA0391O15091 583 aaKnown RBP18.76■□□□□ 0.59
LTBR-207ENST00000539925 NKRFO15226 690 aaKnown RBP eCLIP18.76■□□□□ 0.59
LTBR-207ENST00000539925 SLC16A4O15374 487 aa18.76■□□□□ 0.59
LTBR-207ENST00000539925 GGPS1O95749 300 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms