RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 CCNJLQ8IV13 435 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 ANKRD13AQ8IZ07 590 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 ARHGAP24Q8N264 748 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 ENAHQ8N8S7 591 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-211ENST00000539921 C8orf58Q8NAV2 365 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 SLC43A3Q8NBI5 491 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 FAM13CQ8NE31 585 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 DDHD1Q8NEL9 900 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 RHPN1Q8TCX5 695 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 GIPC2Q8TF65 315 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 DDI1Q8WTU0 396 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 SDCCAG3Q96C92 435 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 OTUD5Q96G74 571 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 EPSTI1Q96J88 318 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 OLFM1Q99784 485 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 IMPG2Q9BZV3 1241 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 SLITRK6Q9H5Y7 841 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 SH2D4AQ9H788 454 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 ECHDC1Q9NTX5 307 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 ABCF3Q9NUQ8 709 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 INTS9Q9NV88 658 aaKnown RBP6.6□□□□□ -1.35
SNHG1-211ENST00000539921 ETNK2Q9NVF9 386 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 KLHL14Q9P2G3 628 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 MAN1B1Q9UKM7 699 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 NFU1Q9UMS0 254 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 TSC22D4Q9Y3Q8 395 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 TELO2Q9Y4R8 837 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 EID1Q9Y6B2 187 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 FAM208AQ9UK61 1670 aaKnown RBP6.6□□□□□ -1.35
SNHG1-211ENST00000539921 ERCC6L2Q5T890 1561 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 ARHGAP5Q13017 1502 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 C1orf167Q5SNV9 1468 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 KIF1BO60333 1816 aa6.6□□□□□ -1.35
SNHG1-211ENST00000539921 PARP4Q9UKK3 1724 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 MROH7-TTC4A0A0A0MT08 1334 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 PCDH11XQ9BZA7 1347 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 IQANK1A0A1B0GTG1 560 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 NUTM2BA6NNL0 878 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 SOBPA7XYQ1 873 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 NUTM2EB1AL46 878 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 GOLGA8MH3BSY2 632 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 ALOX15BO15296 676 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 ZWINTO95229 277 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 ESRRBO95718 433 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 KRT6AP02538 564 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 TFRCP02786 760 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 KRT6BP04259 564 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 EEF1GP26641 437 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 CRABP2P29373 138 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 HMOX2P30519 316 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 HOXA7P31268 230 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 GTF2H1P32780 548 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 CA8P35219 290 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 SERPINB6P35237 376 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 KRT6CP48668 564 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 CARSP49589 748 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 MXI1P50539 228 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 GPC3P51654 580 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 HNRNPFP52597 415 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 RTP1P59025 263 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 MAGOHP61326 146 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 PFKPQ01813 784 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 CYP4A11Q02928 519 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 TBL3Q12788 808 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 TTLL12Q14166 644 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 TNIP1Q15025 636 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 SF3B3Q15393 1217 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 USP41Q3LFD5 358 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 FAM133BQ5BKY9 247 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 C6orf118Q5T5N4 469 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 CYP4A22Q5TCH4 519 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 NIPAL1Q6NVV3 410 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 KLHL35Q6PF15 583 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 C1orf228Q6PIY5 440 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 RGS9BPQ6ZS82 235 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 DHX32Q7L7V1 743 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 CABP7Q86V35 215 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 ZC3H18Q86VM9 953 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 LRRC34Q8IZ02 419 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 ANGPTL6Q8NI99 470 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 UCMAQ8WVF2 138 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 ATL1Q8WXF7 558 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 APPBP2Q92624 585 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 PRCCQ92733 491 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 UTP4Q969X6 686 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 MAGOHBQ96A72 148 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 TMA16Q96EY4 203 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 COX4I2Q96KJ9 171 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 NSMCE3Q96MG7 304 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 BTBD9Q96Q07 612 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 NUP88Q99567 741 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 HAUS7Q99871 368 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 CTRCQ99895 268 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 ROPN1BQ9BZX4 212 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 ROPN1Q9HAT0 212 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 ETNK1Q9HBU6 452 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 DISC1Q9NRI5 854 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 GID8Q9NWU2 228 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 COMMD8Q9NX08 183 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms