RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 MCTP2Q6DN12 878 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 PPP4R3AQ6IN85 833 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 TAF2Q6P1X5 1199 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 ANO5Q75V66 913 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 MIER3Q7Z3K6 550 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 CKAP2LQ8IYA6 745 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 ADSSL1Q8N142 457 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 SLC9A7Q96T83 725 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 POP1Q99575 1024 aaKnown RBP8.15□□□□□ -1.1
LMO3-220ENST00000539232 TEKT3Q9BXF9 490 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 ADAMTS10Q9H324 1103 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 TLR9Q9NR96 1032 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 MTUS1Q9ULD2 1270 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 GINS2Q9Y248 185 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 NOC2LQ9Y3T9 749 aaKnown RBP8.15□□□□□ -1.1
LMO3-220ENST00000539232 SAMM50Q9Y512 469 aa8.15□□□□□ -1.1
LMO3-220ENST00000539232 SETXQ7Z333 2677 aaKnown RBP8.14□□□□□ -1.11
LMO3-220ENST00000539232 ABHD14A-ACY1A0A1B0GW23 586 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 DDX11L8A8MPP1 907 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 GPR32O75388 356 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 GJB5O95377 273 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 OATP04181 439 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 HSP90AA1P07900 732 aaKnown RBP8.14□□□□□ -1.11
LMO3-220ENST00000539232 LINC00271P0C7V0 271 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 ACTN1P12814 892 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 IBSPP21815 317 aaPredicted RBP8.14□□□□□ -1.11
LMO3-220ENST00000539232 CYP4A11Q02928 519 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 IKBKEQ14164 716 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 CTTNQ14247 550 aaKnown RBP8.14□□□□□ -1.11
LMO3-220ENST00000539232 RABEP1Q15276 862 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 ZNF174Q15697 407 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 ZNF484Q5JVG2 852 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 MOXD1Q6UVY6 613 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 RNF135Q8IUD6 432 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 KSR1Q8IVT5 923 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 SMAP1Q8IYB5 467 aaPredicted RBP8.14□□□□□ -1.11
LMO3-220ENST00000539232 MYOCDQ8IZQ8 938 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 CRIPAKQ8N1N5 446 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 METTL13Q8N6R0 699 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 C4orf32Q8N8J7 132 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 FBXO18Q8NFZ0 1043 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 PHOSPHO2Q8TCD6 241 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 SEPT8Q92599 483 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 RMDN1Q96DB5 314 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 DYDC2Q96IM9 177 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 MTMR9Q96QG7 549 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 LLPHQ9BRT6 129 aaKnown RBP8.14□□□□□ -1.11
LMO3-220ENST00000539232 IFIH1Q9BYX4 1025 aaKnown RBP8.14□□□□□ -1.11
LMO3-220ENST00000539232 CELF4Q9BZC1 486 aaKnown RBP8.14□□□□□ -1.11
LMO3-220ENST00000539232 BMP2KQ9NSY1 1161 aaPredicted RBP8.14□□□□□ -1.11
LMO3-220ENST00000539232 HCSTQ9UBK5 93 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 PADI3Q9ULW8 664 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 VPS13AQ96RL7 3174 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 CEP250Q9BV73 2442 aa8.14□□□□□ -1.11
LMO3-220ENST00000539232 SPTBN2O15020 2390 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 SMIM35A0A1B0GVV1 85 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 LINC01553A4QN01 128 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 CAND2O75155 1236 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 BAIAP3O94812 1187 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 AVPR2P30518 371 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 MCM7P33993 719 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 CLCN1P35523 988 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 SLC26A2P50443 739 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 JAK3P52333 1124 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 PPP2R5CQ13362 524 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 PUM1Q14671 1186 aaKnown RBP eCLIP8.13□□□□□ -1.11
LMO3-220ENST00000539232 IL17AQ16552 155 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 MTERF2Q49AM1 385 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 NCAPH2Q6IBW4 605 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 FAM177A1Q8N128 213 aaPredicted RBP8.13□□□□□ -1.11
LMO3-220ENST00000539232 GDPD5Q8WTR4 605 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 BBXQ8WY36 941 aaPredicted RBP8.13□□□□□ -1.11
LMO3-220ENST00000539232 WASF1Q92558 559 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 NKD2Q969F2 451 aaPredicted RBP8.13□□□□□ -1.11
LMO3-220ENST00000539232 TOP1MTQ969P6 601 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 C8orf76Q96K31 380 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 ZSCAN31Q96LW9 406 aaPredicted RBP8.13□□□□□ -1.11
LMO3-220ENST00000539232 OSMRQ99650 979 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 C17orf80Q9BSJ5 609 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 SUGCTQ9HAC7 445 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 ERVK-5Q9HDB9 667 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 SH2B1Q9NRF2 756 aaPredicted RBP8.13□□□□□ -1.11
LMO3-220ENST00000539232 TRPV2Q9Y5S1 764 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 MYO15AQ9UKN7 3530 aa8.13□□□□□ -1.11
LMO3-220ENST00000539232 IGKV6-21A0A0C4DH24 114 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 POTEMA6NI47 508 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 H3BQ06 376 aaPredicted RBP8.12□□□□□ -1.11
LMO3-220ENST00000539232 SLITRK3O94933 977 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 SPATA31C1P0DKV0 1188 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 XBP1P17861 261 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 TXKP42681 527 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 KCNJ6P48051 423 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 VCPP55072 806 aaKnown RBP8.12□□□□□ -1.11
LMO3-220ENST00000539232 NLRP11P59045 1033 aaKnown RBP8.12□□□□□ -1.11
LMO3-220ENST00000539232 HTRA4P83105 476 aaPredicted RBP8.12□□□□□ -1.11
LMO3-220ENST00000539232 DSC3Q14574 896 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 ECM1Q16610 540 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 EFCAB12Q6NXP0 572 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 TSHZ1Q6ZSZ6 1077 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 FAM228AQ86W67 206 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms