RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 MS4A14Q96JA4 679 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 EHD4Q9H223 541 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 METTL14Q9HCE5 456 aaKnown RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 RBM12Q9NTZ6 932 aaKnown RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 TNKSO95271 1327 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 NEURL1BA8MQ27 555 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 GYG2O15488 501 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ITGA6P23229 1130 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 KIF22Q14807 665 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 TRIML2Q8N7C3 387 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 SYT2Q8N9I0 419 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 RASGRP4Q8TDF6 673 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PPP2R3CQ969Q6 453 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 IFT122Q9HBG6 1241 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PKD2L1Q9P0L9 805 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 FBXO2Q9UK22 296 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 MROH7Q68CQ1 1323 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 DRD4P21917 467 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 DHX34Q14147 1143 aaKnown RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 MAN2A1Q16706 1144 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 GPBP1Q86WP2 473 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 DTX3LQ8TDB6 740 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 MAML1Q92585 1016 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 FAM89AQ96GI7 184 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 AK8Q96MA6 479 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ZSCAN10Q96SZ4 725 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 SENP1Q9P0U3 644 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 WDR35Q9P2L0 1181 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 SAP30BPQ9UHR5 308 aaKnown RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ANAPC5Q9UJX4 755 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PNMA2Q9UL42 364 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 KIDINS220Q9ULH0 1771 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PODXLO00592 558 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 IRS4O14654 1257 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 EXOC3O60645 756 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 CIAO1O76071 339 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 HAUS5O94927 633 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 GCNT3O95395 438 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 MAN1A1P33908 653 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PHBP35232 272 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 MMP13P45452 471 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 XIAPP98170 497 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 RASA3Q14644 834 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 LRRC24Q50LG9 513 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 TEKT1Q969V4 418 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 MAK16Q9BXY0 300 aaKnown RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 TYW1Q9NV66 732 aaKnown RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 SERPING1P05155 500 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PLS3P13797 630 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ADCY7P51828 1080 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PPP2R5CQ13362 524 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ACVR2BQ13705 512 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 SPIDRQ14159 915 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 DAB2IPQ5VWQ8 1189 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 IFNL3Q8IZI9 196 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ZNF398Q8TD17 642 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 STK32AQ8WU08 396 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 TTC1Q99614 292 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 MTRQ99707 1265 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 FOXP3Q9BZS1 431 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 GPCPD1Q9NPB8 672 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PANK4Q9NVE7 773 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 FGFR1OP2Q9NVK5 253 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 TBCCD1Q9NVR7 557 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 LZTS1Q9Y250 596 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ACTL7BQ9Y614 415 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ADRM1Q16186 407 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ANKRD20A4Q4UJ75 823 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 GALNT17Q6IS24 598 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 C16orf87Q6PH81 154 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 APTXQ7Z2E3 356 aaKnown RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 KRT26Q7Z3Y9 468 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 TMC4Q7Z404 712 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 CCDC89Q8N998 374 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 RAPGEF5Q92565 580 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 FAM161BQ96MY7 647 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 FERMT1Q9BQL6 677 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 BCAP29Q9UHQ4 241 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ZNF609O15014 1411 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 CCNE1P24864 410 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 CYP2J2P51589 502 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ALX1Q15699 326 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 NXNQ6DKJ4 435 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 RIC8AQ9NPQ8 531 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ADAMTS1Q9UHI8 967 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 PCDH11XQ9BZA7 1347 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 PCDH11YQ9BZA8 1340 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ARHGAP10A1A4S6 786 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 DNM1LO00429 736 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 NVLO15381 856 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 EYA4O95677 639 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 CA4P22748 312 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ARHGAP4P98171 946 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 PROSER3Q2NL68 480 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 LGSNQ5TDP6 509 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 MAEAQ7L5Y9 396 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 PROM2Q8N271 834 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ENDOVQ8N8Q3 282 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 SPATA5Q8NB90 893 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 VTI1AQ96AJ9 217 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms