RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 DDR2Q16832 855 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 FKBP15Q5T1M5 1219 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 HECTD2Q5U5R9 776 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 C1QL3Q5VWW1 255 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 KCNV1Q6PIU1 500 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 LRRC55Q6ZSA7 311 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 BHLHA9Q7RTU4 235 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 ELOA2Q8IYF1 753 aaPredicted RBP4.01□□□□□ -1.77
SKA3-207ENST00000536239 HIPK4Q8NE63 616 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 CALML6Q8TD86 181 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 ATXN2LQ8WWM7 1075 aaKnown RBP4.01□□□□□ -1.77
SKA3-207ENST00000536239 PTPRN2Q92932 1015 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 GCDHQ92947 438 aaPredicted RBP4.01□□□□□ -1.77
SKA3-207ENST00000536239 GFM2Q969S9 779 aaKnown RBP4.01□□□□□ -1.77
SKA3-207ENST00000536239 PGBD4Q96DM1 585 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 R3HCC1Q9Y3T6 440 aaKnown RBP4.01□□□□□ -1.77
SKA3-207ENST00000536239 RBM8AQ9Y5S9 174 aaKnown RBP4.01□□□□□ -1.77
SKA3-207ENST00000536239 CCDC66A2RUB6 948 aa4□□□□□ -1.77
SKA3-207ENST00000536239 RASSF10A6NK89 507 aa4□□□□□ -1.77
SKA3-207ENST00000536239 SCDO00767 359 aa4□□□□□ -1.77
SKA3-207ENST00000536239 KIAA0355O15063 1070 aa4□□□□□ -1.77
SKA3-207ENST00000536239 FOXP2O15409 715 aa4□□□□□ -1.77
SKA3-207ENST00000536239 MFAP3LO75121 409 aa4□□□□□ -1.77
SKA3-207ENST00000536239 CDK4P11802 303 aa4□□□□□ -1.77
SKA3-207ENST00000536239 GUCY1A3Q02108 690 aa4□□□□□ -1.77
SKA3-207ENST00000536239 PAPD7Q5XG87 772 aaKnown RBP4□□□□□ -1.77
SKA3-207ENST00000536239 MFSD5Q6N075 450 aa4□□□□□ -1.77
SKA3-207ENST00000536239 NOSTRINQ8IVI9 506 aa4□□□□□ -1.77
SKA3-207ENST00000536239 LRRC47Q8N1G4 583 aaKnown RBP4□□□□□ -1.77
SKA3-207ENST00000536239 HNRNPLLQ8WVV9 542 aaKnown RBP4□□□□□ -1.77
SKA3-207ENST00000536239 BUD13Q9BRD0 619 aaKnown RBP eCLIP4□□□□□ -1.77
SKA3-207ENST00000536239 IL23AQ9NPF7 189 aa4□□□□□ -1.77
SKA3-207ENST00000536239 KCNH7Q9NS40 1196 aa4□□□□□ -1.77
SKA3-207ENST00000536239 SAE1Q9UBE0 346 aaPredicted RBP4□□□□□ -1.77
SKA3-207ENST00000536239 COX11Q9Y6N1 276 aa4□□□□□ -1.77
SKA3-207ENST00000536239 COL11A2P13942 1736 aaPredicted RBP4□□□□□ -1.77
SKA3-207ENST00000536239 NAT1P18440 290 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 ITGB6P18564 788 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 CLK3P49761 638 aaKnown RBP3.99□□□□□ -1.77
SKA3-207ENST00000536239 DNM2P50570 870 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 TAP1Q03518 808 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 TCIRG1Q13488 830 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 GAGE13Q4V321 117 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 TM4SF20Q53R12 229 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 FAM47CQ5HY64 1035 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 TMCO4Q5TGY1 634 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 NAIF1Q69YI7 327 aaPredicted RBP3.99□□□□□ -1.77
SKA3-207ENST00000536239 BEND2Q8NDZ0 799 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 ST13P5Q8NFI4 369 aaPredicted RBP3.99□□□□□ -1.77
SKA3-207ENST00000536239 MDGA1Q8NFP4 955 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 MRRFQ96E11 262 aaKnown RBP3.99□□□□□ -1.77
SKA3-207ENST00000536239 MAGEL2Q9UJ55 1249 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 DENND2AQ9ULE3 1009 aa3.99□□□□□ -1.77
SKA3-207ENST00000536239 IPO13O94829 963 aaKnown RBP3.98□□□□□ -1.77
SKA3-207ENST00000536239 SDHAP31040 664 aa3.98□□□□□ -1.77
SKA3-207ENST00000536239 TIGD2Q4W5G0 525 aa3.98□□□□□ -1.77
SKA3-207ENST00000536239 NBPF6Q5VWK0 638 aa3.98□□□□□ -1.77
SKA3-207ENST00000536239 MB21D1Q8N884 522 aa3.98□□□□□ -1.77
SKA3-207ENST00000536239 NBPF4Q96M43 638 aa3.98□□□□□ -1.77
SKA3-207ENST00000536239 ZNF512Q96ME7 567 aaPredicted RBP3.98□□□□□ -1.77
SKA3-207ENST00000536239 CYP4F11Q9HBI6 524 aa3.98□□□□□ -1.77
SKA3-207ENST00000536239 RCAN3Q9UKA8 241 aa3.98□□□□□ -1.77
SKA3-207ENST00000536239 SETD1BQ9UPS6 1966 aaKnown RBP3.97□□□□□ -1.77
SKA3-207ENST00000536239 FGRP09769 529 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 C6orf222P0C671 652 aaPredicted RBP3.97□□□□□ -1.77
SKA3-207ENST00000536239 ZFP36P26651 326 aaKnown RBP3.97□□□□□ -1.77
SKA3-207ENST00000536239 ANTXR2P58335 489 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 ALDH6A1Q02252 535 aaKnown RBP3.97□□□□□ -1.77
SKA3-207ENST00000536239 PLEKHG4Q58EX7 1191 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 FSTL4Q6MZW2 842 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 RD3Q7Z3Z2 195 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 CXorf67Q86X51 503 aaPredicted RBP3.97□□□□□ -1.77
SKA3-207ENST00000536239 ZC3H7AQ8IWR0 971 aaKnown RBP3.97□□□□□ -1.77
SKA3-207ENST00000536239 CPT1CQ8TCG5 803 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 DLG3Q92796 817 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 NKD2Q969F2 451 aaPredicted RBP3.97□□□□□ -1.77
SKA3-207ENST00000536239 C16orf92Q96LL3 132 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 PRDM13Q9H4Q3 707 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 SORCS3Q9UPU3 1222 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 PCDHA9Q9Y5H5 950 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 B3GALT1Q9Y5Z6 326 aa3.97□□□□□ -1.77
SKA3-207ENST00000536239 VSIG10L2P0DP72 767 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 TMEM132BQ14DG7 1078 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 EPHA10Q5JZY3 1008 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 CATSPEREQ5SY80 951 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 Q6YL49 198 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 ANKS3Q6ZW76 656 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 CISD2Q8N5K1 135 aaKnown RBP3.96□□□□□ -1.78
SKA3-207ENST00000536239 PLA2G15Q8NCC3 412 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 ST8SIA2Q92186 375 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 ERCC4Q92889 916 aaPredicted RBP3.96□□□□□ -1.78
SKA3-207ENST00000536239 ARL8AQ96BM9 186 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 SPATA9Q9BWV2 254 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 R3HDMLQ9H3Y0 253 aa3.96□□□□□ -1.78
SKA3-207ENST00000536239 TRBV23-1A0A0A0MS06 115 aa3.95□□□□□ -1.78
SKA3-207ENST00000536239 CENPVL1A0A0U1RR11 272 aa3.95□□□□□ -1.78
SKA3-207ENST00000536239 KLF4O43474 513 aa3.95□□□□□ -1.78
SKA3-207ENST00000536239 RECQL4O94761 1208 aa3.95□□□□□ -1.78
SKA3-207ENST00000536239 TOX4O94842 621 aa3.95□□□□□ -1.78
SKA3-207ENST00000536239 CRTAMO95727 393 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms