RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 C7orf25Q9BPX7 421 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 AMNQ9BXJ7 453 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 PICK1Q9NRD5 415 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 ZNF70Q9UC06 446 aaPredicted RBP15.17■□□□□ 0.02
LIG1-203ENST00000536218 A8MUI8 341 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 ENTPD3O75355 529 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 TCP1P17987 556 aaKnown RBP15.17■□□□□ 0.02
LIG1-203ENST00000536218 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.021e-6■■■■□ 25.2
LIG1-203ENST00000536218 EMC10Q5UCC4 262 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 SYDE2Q5VT97 1194 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 PPP1R18Q6NYC8 613 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 CASKIN2Q8WXE0 1202 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 FOCADQ5VW36 1801 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 LRRD1A4D1F6 860 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 GHRP10912 638 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 MAGOHP61326 146 aaKnown RBP15.16■□□□□ 0.02
LIG1-203ENST00000536218 PPP2R2AP63151 447 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 ANKRD20A2Q5SQ80 823 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 ANKRD20A1Q5TYW2 823 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 SPATA21Q7Z572 469 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 KIF2BQ8N4N8 673 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 TEKT4Q8WW24 435 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 RUBCNQ92622 972 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 P2RX5Q93086 422 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 MAGOHBQ96A72 148 aaKnown RBP15.16■□□□□ 0.02
LIG1-203ENST00000536218 NDST4Q9H3R1 872 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 ZHX3Q9H4I2 956 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 SLC12A6Q9UHW9 1150 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 HDAC9Q9UKV0 1011 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 MYH4Q9Y623 1939 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 DCDC2CA8MYV0 355 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 E9PMD0 336 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 NKRFO15226 690 aaKnown RBP eCLIP15.16■□□□□ 0.02
LIG1-203ENST00000536218 ZBTB7AO95365 584 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 MYL1P05976 194 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 TTI2Q6NXR4 508 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 CCDC174Q6PII3 467 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 SLC30A10Q6XR72 485 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 CD302Q8IX05 232 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 KLHL7Q8IXQ5 586 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 MB21D1Q8N884 522 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 GLIS3Q8NEA6 775 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 UBLCP1Q8WVY7 318 aaPredicted RBP15.16■□□□□ 0.02
LIG1-203ENST00000536218 DDX12PQ92771 950 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 P3H4Q92791 437 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 DNAJC7Q99615 494 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 DUSP9Q99956 384 aaKnown RBP15.16■□□□□ 0.02
LIG1-203ENST00000536218 IFIH1Q9BYX4 1025 aaKnown RBP15.16■□□□□ 0.02
LIG1-203ENST00000536218 ARHGEF10LQ9HCE6 1279 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 KIAA1024Q9UPX6 916 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 LRRC10BA6NIK2 292 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 MEIS2O14770 477 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 CTNND1O60716 968 aaKnown RBP15.16■□□□□ 0.02
LIG1-203ENST00000536218 LUC7L3O95232 432 aaKnown RBP15.16■□□□□ 0.02
LIG1-203ENST00000536218 MTIF2P46199 727 aaKnown RBP15.16■□□□□ 0.02
LIG1-203ENST00000536218 KLK7P49862 253 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 POLE2P56282 527 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 KIAA1755Q5JYT7 1200 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 KIAA0895Q8NCT3 520 aa15.16■□□□□ 0.02
LIG1-203ENST00000536218 SPDYE5A6NIY4 337 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 PLEKP08567 350 aaPredicted RBP15.15■□□□□ 0.02
LIG1-203ENST00000536218 PPP1R15BQ5SWA1 713 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 ARHGAP22Q7Z5H3 698 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 TAX1BP1Q86VP1 789 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 RTKN2Q8IZC4 609 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 TRIM4Q9C037 500 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
LIG1-203ENST00000536218 SRRM3A6NNA2 597 aaPredicted RBP15.15■□□□□ 0.02
LIG1-203ENST00000536218 HGSO14964 777 aaPredicted RBP15.15■□□□□ 0.02
LIG1-203ENST00000536218 BUB1O43683 1085 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 DRD4P21917 467 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 CCNE1P24864 410 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 PCK1P35558 622 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 ALDH5A1P51649 535 aaPredicted RBP15.15■□□□□ 0.02
LIG1-203ENST00000536218 UBXN2AP68543 259 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 PDIA5Q14554 519 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 LRRC23Q53EV4 343 aaPredicted RBP15.15■□□□□ 0.02
LIG1-203ENST00000536218 FAM83BQ5T0W9 1011 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 CNNM4Q6P4Q7 775 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 PROCA1Q8NCQ7 364 aaPredicted RBP15.15■□□□□ 0.02
LIG1-203ENST00000536218 TBC1D5Q92609 795 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 RAD54LQ92698 747 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 MAGEF1Q9HAY2 307 aa15.15■□□□□ 0.02
LIG1-203ENST00000536218 POTEB3A0JP26 581 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 A6NHS1 94 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 RASSF10A6NK89 507 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 POTECB2RU33 542 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 CFBP00751 764 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 ARHGAP4P98171 946 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 CFAP221Q4G0U5 840 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 POTEBQ6S5H4 581 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 CYP2W1Q8TAV3 490 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 CHMP6Q96FZ7 201 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 DHTKD1Q96HY7 919 aaPredicted RBP15.14■□□□□ 0.01
LIG1-203ENST00000536218 TUBGCP2Q9BSJ2 902 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 PRR12Q9ULL5 1215 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 CAPN11Q9UMQ6 739 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 NPHP3-ACAD11A0A0J9YXS1 232 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 240.8 ms