RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 NTPCRQ9BSD7 190 aaKnown RBP17.99■□□□□ 0.47
VAMP1-205ENST00000535927 PARVGQ9HBI0 331 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 SETD4Q9NVD3 440 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 USO1O60763 962 aaKnown RBP17.98■□□□□ 0.47
VAMP1-205ENST00000535927 FAM13AO94988 1023 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 MYCP01106 439 aaPredicted RBP17.98■□□□□ 0.47
VAMP1-205ENST00000535927 ARL2P36404 184 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 SARSP49591 514 aaKnown RBP17.98■□□□□ 0.47
VAMP1-205ENST00000535927 ASIC1P78348 528 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 ALCAMQ13740 583 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 TFDP1Q14186 410 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 SNX17Q15036 470 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 MARCH8Q5T0T0 291 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 EFCAB12Q6NXP0 572 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 STXBP4Q6ZWJ1 553 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 LINC01465Q8N7H1 131 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 SPIRE2Q8WWL2 714 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 PSPC1Q8WXF1 523 aaKnown RBP17.98■□□□□ 0.47
VAMP1-205ENST00000535927 RUSC1Q9BVN2 902 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 OLFML3Q9NRN5 406 aa17.98■□□□□ 0.47
VAMP1-205ENST00000535927 TLR3O15455 904 aaKnown RBP17.97■□□□□ 0.47
VAMP1-205ENST00000535927 RHOBTB3O94955 611 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 KIF20AO95235 890 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 RPN1P04843 607 aaKnown RBP17.97■□□□□ 0.47
VAMP1-205ENST00000535927 PLS3P13797 630 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 MNX1P50219 401 aaPredicted RBP17.97■□□□□ 0.47
VAMP1-205ENST00000535927 PTK7Q13308 1070 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 PCBP1Q15365 356 aaKnown RBP eCLIP17.97■□□□□ 0.47
VAMP1-205ENST00000535927 CT47A1Q5JQC4 288 aaPredicted RBP17.97■□□□□ 0.47
VAMP1-205ENST00000535927 SLC39A5Q6ZMH5 540 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 TRMT1LQ7Z2T5 733 aaKnown RBP17.97■□□□□ 0.47
VAMP1-205ENST00000535927 ANKRD33Q7Z3H0 272 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 SERINC5Q86VE9 423 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 REEP2Q9BRK0 252 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 NFKBIZQ9BYH8 718 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 C11orf49Q9H6J7 331 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 XPNPEP1Q9NQW7 623 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 PANK4Q9NVE7 773 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 PCDHA5Q9Y5H7 936 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 TRIP12Q14669 1992 aaPredicted RBP17.97■□□□□ 0.47
VAMP1-205ENST00000535927 GRIN2DO15399 1336 aa17.97■□□□□ 0.47
VAMP1-205ENST00000535927 A0A087WWV3 80 aa17.96■□□□□ 0.47
VAMP1-205ENST00000535927 HIP1RO75146 1068 aa17.96■□□□□ 0.47
VAMP1-205ENST00000535927 DMP1Q13316 513 aaPredicted RBP17.96■□□□□ 0.47
VAMP1-205ENST00000535927 CUL4BQ13620 913 aa17.96■□□□□ 0.47
VAMP1-205ENST00000535927 FAM47CQ5HY64 1035 aa17.96■□□□□ 0.47
VAMP1-205ENST00000535927 FAM102BQ5T8I3 360 aa17.96■□□□□ 0.47
VAMP1-205ENST00000535927 DYMQ7RTS9 669 aa17.96■□□□□ 0.47
VAMP1-205ENST00000535927 ZNF410Q86VK4 478 aa17.96■□□□□ 0.47
VAMP1-205ENST00000535927 CCDC155Q8N6L0 562 aa17.96■□□□□ 0.47
VAMP1-205ENST00000535927 SENP6Q9GZR1 1112 aaPredicted RBP17.96■□□□□ 0.47
VAMP1-205ENST00000535927 ST6GALNAC4Q9H4F1 302 aa17.96■□□□□ 0.47
VAMP1-205ENST00000535927 SUGCTQ9HAC7 445 aa17.96■□□□□ 0.47
VAMP1-205ENST00000535927 TRIOBPQ9H2D6 2365 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 TMEM150BA6NC51 233 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 DCDC2CA8MYV0 355 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 CYP2C9P11712 490 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 IDEP14735 1019 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 NAMPTP43490 491 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 EFNA5P52803 228 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 IGBP1P78318 339 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 EHHADHQ08426 723 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 PNOCQ13519 176 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 PTGISQ16647 500 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 COBLL1Q53SF7 1204 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 HERC4Q5GLZ8 1057 aaPredicted RBP17.95■□□□□ 0.46
VAMP1-205ENST00000535927 CAVIN1Q6NZI2 390 aaKnown RBP17.95■□□□□ 0.46
VAMP1-205ENST00000535927 KIAA0319LQ8IZA0 1049 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 METTL13Q8N6R0 699 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 CAGE1Q8TC20 777 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 INO80BQ9C086 356 aaPredicted RBP17.95■□□□□ 0.46
VAMP1-205ENST00000535927 C2orf40Q9H1Z8 148 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 EXOC1Q9NV70 894 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 SUCLA2Q9P2R7 463 aaPredicted RBP17.95■□□□□ 0.46
VAMP1-205ENST00000535927 NOD1Q9Y239 953 aa17.95■□□□□ 0.46
VAMP1-205ENST00000535927 MKI67P46013 3256 aaKnown RBP17.95■□□□□ 0.46
VAMP1-205ENST00000535927 HTTP42858 3142 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 KLRC4O43908 158 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 PARNO95453 639 aaKnown RBP17.94■□□□□ 0.46
VAMP1-205ENST00000535927 EN2P19622 333 aaPredicted RBP17.94■□□□□ 0.46
VAMP1-205ENST00000535927 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 RBL2Q08999 1139 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 MAPK7Q13164 816 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 CAMK4Q16566 473 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 GDF6Q6KF10 455 aaPredicted RBP17.94■□□□□ 0.46
VAMP1-205ENST00000535927 IFNLR1Q8IU57 520 aaPredicted RBP17.94■□□□□ 0.46
VAMP1-205ENST00000535927 MYCT1Q8N699 235 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 STAMQ92783 540 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 HVCN1Q96D96 273 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 POLR3FQ9H1D9 316 aaPredicted RBP17.94■□□□□ 0.46
VAMP1-205ENST00000535927 TMEM63CQ9P1W3 806 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 PCDHB13Q9Y5F0 798 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 SQORQ9Y6N5 450 aa17.94■□□□□ 0.46
VAMP1-205ENST00000535927 M0QZ92 97 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 TREHO43280 583 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 CAVIN2O95810 425 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 COASYQ13057 564 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 BFSP2Q13515 415 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 ODR4Q5SWX8 454 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 SASS6Q6UVJ0 657 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms