RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 NLRP7Q8WX94 980 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 NAP1L4Q99733 375 aaKnown RBP9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 SH2D3AQ9BRG2 576 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 PLVAPQ9BX97 442 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 LMAN2LQ9H0V9 348 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 ADAMTS10Q9H324 1103 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 BRMS1Q9HCU9 246 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 ALG13Q9NP73 1137 aaKnown RBP9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 RNF216Q9NWF9 866 aaPredicted RBP9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 TRANK1O15050 2925 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 VCANP13611 3396 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 CUL9Q8IWT3 2517 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 PLXNA4Q9HCM2 1894 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 FAM205CA6NFA0 338 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 TBKBP1A7MCY6 615 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 DDX11L8A8MPP1 907 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 C9IYK1 514 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 EML1O00423 815 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 JAK2O60674 1132 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 STBD1O95210 358 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 MMP1P03956 469 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 PDIA4P13667 645 aaKnown RBP9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 FDPSP14324 419 aaKnown RBP9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 ZSCAN20P17040 1043 aaPredicted RBP9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 FGFR4P22455 802 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 PSMC5P62195 406 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 NR5A1Q13285 461 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 PPP2R5CQ13362 524 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 DRP2Q13474 957 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 DSC3Q14574 896 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 TARBP2Q15633 366 aaKnown RBP9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 LEXMQ3ZCV2 418 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 EARS2Q5JPH6 523 aaKnown RBP9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 FAM102BQ5T8I3 360 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 TAF3Q5VWG9 929 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 PLA2G4FQ68DD2 849 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 NCAPH2Q6IBW4 605 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 POTEDQ86YR6 584 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 NSUN7Q8NE18 718 aaKnown RBP9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 P2RX5Q93086 422 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 FAM20AQ96MK3 541 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 NIFKQ9BYG3 293 aaKnown RBP9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 ATP6V0A4Q9HBG4 840 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 KCNMB3Q9NPA1 279 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 CLDND1Q9NY35 253 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 VAV3Q9UKW4 847 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 PLAGL2Q9UPG8 496 aa9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 SPTBN5Q9NRC6 3674 aaKnown RBP9.58□□□□□ -0.88
SFSWAP-202ENST00000535202 H3BQ06 376 aaPredicted RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 DKC1O60832 514 aaKnown RBP eCLIP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 CSDE1O75534 798 aaKnown RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 BAG4O95429 457 aaKnown RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 ITGB1P05556 798 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 FGFR1P11362 822 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 DARSP14868 501 aaKnown RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 IL9P15248 144 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 EIF4BP23588 611 aaKnown RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 QARSP47897 775 aaKnown RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 TRIM29Q14134 588 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 NAALADL2Q58DX5 795 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 PTCRAQ6ISU1 281 aaPredicted RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 FAM43BQ6ZT52 329 aaPredicted RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 ANO5Q75V66 913 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 ZNF710Q8N1W2 664 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 KLHL23Q8NBE8 558 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 POF1BQ8WVV4 589 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 PABPC5Q96DU9 382 aaKnown RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 CEP89Q96ST8 783 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 GCOM2Q9BZD3 368 aaPredicted RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 IGFLR1Q9H665 355 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 ELAC1Q9H777 363 aaKnown RBP9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 AAASQ9NRG9 546 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 TMEM161AQ9NX61 479 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 HCSTQ9UBK5 93 aa9.57□□□□□ -0.88
SFSWAP-202ENST00000535202 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 A0A087WZ62 844 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 IGKV6-21A0A0C4DH24 114 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 TBX3O15119 743 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 MAFO75444 373 aaPredicted RBP9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 P4HBP07237 508 aaKnown RBP9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 DNAJB1P25685 340 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 MCM4P33991 863 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 GTF2F1P35269 517 aaKnown RBP eCLIP9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 DNM2P50570 870 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 NPEPPSP55786 919 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 FAM189BP81408 668 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 ST3GAL1Q11201 340 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 HYAL1Q12794 435 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 EPHA7Q15375 998 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 ECHDC2Q86YB7 292 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 RHPN2Q8IUC4 686 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 DIS3L2Q8IYB7 885 aaKnown RBP9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 SLFN12Q8IYM2 578 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 THNSL1Q8IYQ7 743 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 ABI1Q8IZP0 508 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 RNF169Q8NCN4 708 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 SPPL3Q8TCT6 385 aa9.56□□□□□ -0.88
SFSWAP-202ENST00000535202 NEK9Q8TD19 979 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms