RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 KRT23Q9C075 422 aa6.64□□□□□ -1.35
CLNS1A-212ENST00000533957 SIL1Q9H173 461 aa6.64□□□□□ -1.35
CLNS1A-212ENST00000533957 BRMS1Q9HCU9 246 aa6.64□□□□□ -1.35
CLNS1A-212ENST00000533957 PARD6AQ9NPB6 346 aa6.64□□□□□ -1.35
CLNS1A-212ENST00000533957 KBTBD4Q9NVX7 518 aa6.64□□□□□ -1.35
CLNS1A-212ENST00000533957 CLIP2Q9UDT6 1046 aa6.64□□□□□ -1.35
CLNS1A-212ENST00000533957 STK36Q9NRP7 1315 aa6.64□□□□□ -1.35
CLNS1A-212ENST00000533957 ANKRD18BA2A2Z9 1011 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 PTPDC1A2A3K4 754 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 GOLIM4O00461 696 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 EXOC5O00471 708 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 SPTLC2O15270 562 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 GREM1O60565 184 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 ATE1O95260 518 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 LARGE1O95461 756 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 RAG1P15918 1043 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 BMP7P18075 431 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 KIR2DL1P43626 348 aaPredicted RBP6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 KIR2DL2P43627 348 aaPredicted RBP6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 ME1P48163 572 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 PIP4K2AP48426 406 aaPredicted RBP6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 RNF4P78317 190 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 ST3GAL1Q11201 340 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 SNW1Q13573 536 aaKnown RBP6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 SLC39A14Q15043 492 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 IQCB1Q15051 598 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 STK38Q15208 465 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 PTPN14Q15678 1187 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 SLC14A2Q15849 920 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 ZNF385BQ569K4 471 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 ADGRF1Q5T601 910 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 CCDC186Q7Z3E2 898 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 TMC3Q7Z5M5 1100 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 LINC00301Q8NCQ3 95 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 LINC00116Q8NCU8 138 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 LPIN2Q92539 896 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 DDX11Q96FC9 970 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 MAP6Q96JE9 813 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 KCNQ5Q9NR82 932 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 TCFL5Q9UL49 500 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 KCTD3Q9Y597 815 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 PCDHB14Q9Y5E9 798 aa6.63□□□□□ -1.35
CLNS1A-212ENST00000533957 ZNF609O15014 1411 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 NID2Q14112 1375 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 SSU72P8A0A1W2PR75 194 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 TMEM82A0PJX8 343 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 ERICH2A1L162 156 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 ZSCAN12O43309 604 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 CUTAO60888 179 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 USP2O75604 605 aaPredicted RBP6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 KIF20AO95235 890 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 FGAP02671 866 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 SLC3A2P08195 630 aaKnown RBP6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 U2AF2P26368 475 aaKnown RBP eCLIP6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 IL6STP40189 918 aaPredicted RBP6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 BUD31P41223 144 aaPredicted RBP6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 PCBP3P57721 371 aaKnown RBP6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 SRSF3P84103 164 aaKnown RBP6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 MAP3K12Q12852 859 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 SLC39A6Q13433 755 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 PARP10Q53GL7 1025 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 RILPL1Q5EBL4 403 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 EPHA10Q5JZY3 1008 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 LCE5AQ5TCM9 118 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 OLFM4Q6UX06 510 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 ERMP1Q7Z2K6 904 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 ANKRD7Q92527 254 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 PGBD1Q96JS3 809 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 CDC5LQ99459 802 aaKnown RBP6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 ZCCHC4Q9H5U6 513 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 CRTAC1Q9NQ79 661 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 TMOD3Q9NYL9 352 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 OGFRQ9NZT2 677 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 GMIPQ9P107 970 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 RIPOR2Q9Y4F9 1068 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 MYH14Q7Z406 1995 aaKnown RBP6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 AFDNP55196 1824 aaKnown RBP6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 BCORQ6W2J9 1755 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 ARFGEF2Q9Y6D5 1785 aa6.62□□□□□ -1.35
CLNS1A-212ENST00000533957 PDE8AO60658 829 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 PDE8BO95263 885 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 CALM1P0DP23 149 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 CALM2P0DP24 149 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 CALM3P0DP25 149 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 TNNT1P13805 278 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 CPA1P15085 419 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 EIF4A3P38919 411 aaKnown RBP6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 TIMM10P62072 90 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 SSPNQ14714 243 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 CAMK4Q16566 473 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 TPD52L1Q16890 204 aaPredicted RBP6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 CCDC178Q5BJE1 867 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 TCERG1LQ5VWI1 586 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 CDCP2Q5VXM1 449 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 ANO1Q5XXA6 986 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 ZPBP2Q6X784 338 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 LDHAL6AQ6ZMR3 332 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 CEP128Q6ZU80 1094 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 DEFB132Q7Z7B7 95 aa6.61□□□□□ -1.35
CLNS1A-212ENST00000533957 FERMT3Q86UX7 667 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms