RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 NUP88Q99567 741 aaPredicted RBP8.86□□□□□ -0.99
CASP4-212ENST00000533730 USP26Q9BXU7 913 aa8.86□□□□□ -0.99
CASP4-212ENST00000533730 SPATC1LQ9H0A9 340 aa8.86□□□□□ -0.99
CASP4-212ENST00000533730 TXNRD2Q9NNW7 524 aa8.86□□□□□ -0.99
CASP4-212ENST00000533730 FBXO28Q9NVF7 368 aa8.86□□□□□ -0.99
CASP4-212ENST00000533730 FRRS1LQ9P0K9 344 aa8.86□□□□□ -0.99
CASP4-212ENST00000533730 SRRDQ9UH36 339 aa8.86□□□□□ -0.99
CASP4-212ENST00000533730 PFDN2Q9UHV9 154 aa8.86□□□□□ -0.99
CASP4-212ENST00000533730 TAF6LQ9Y6J9 622 aa8.86□□□□□ -0.99
CASP4-212ENST00000533730 A0A0G2JMZ2 1700 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 B2RBV5 119 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 PDE2AO00408 941 aaPredicted RBP8.85□□□□□ -0.99
CASP4-212ENST00000533730 STRNO43815 780 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 CNMDO75829 334 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 PARP1P09874 1014 aaKnown RBP8.85□□□□□ -0.99
CASP4-212ENST00000533730 LIFRP42702 1097 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 PPP2R5EQ16537 467 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 KCTD1Q719H9 257 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 SPATC1Q76KD6 591 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 PLEKHH3Q7Z736 793 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 CATIPQ7Z7H3 387 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 RIOX2Q8IUF8 465 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 REXO1Q8N1G1 1221 aaKnown RBP8.85□□□□□ -0.99
CASP4-212ENST00000533730 IGDCC4Q8TDY8 1250 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 SOCS4Q8WXH5 440 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 TTC9Q92623 222 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 MAP3K14Q99558 947 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 TEX13BQ9BXU2 312 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 MCOLN1Q9GZU1 580 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 MUC3BQ9H195 1237 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 MROH8Q9H579 483 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 BTBD7Q9P203 1132 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 PTPN22Q9Y2R2 807 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 PTCH2Q9Y6C5 1203 aa8.85□□□□□ -0.99
CASP4-212ENST00000533730 RLFQ13129 1914 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 CCDC69A6NI79 296 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 SLC15A5A6NIM6 579 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 SH2B2O14492 632 aaPredicted RBP8.84□□□□□ -0.99
CASP4-212ENST00000533730 DDAH1O94760 285 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 PDGFRBP09619 1106 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 CALM1P0DP23 149 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 CALM2P0DP24 149 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 CALM3P0DP25 149 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 BMP6P22004 513 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 STAT3P40763 770 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 ANTXR2P58335 489 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 PLS1Q14651 629 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 SYDE2Q5VT97 1194 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 BLOC1S2Q6QNY1 142 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 SYNE3Q6ZMZ3 975 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 NFXL1Q6ZNB6 911 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 ABRAQ8N0Z2 381 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 RAET1EQ8TD07 263 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 MOV10L1Q9BXT6 1211 aaKnown RBP8.84□□□□□ -0.99
CASP4-212ENST00000533730 ARHGAP39Q9C0H5 1083 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 SLC38A10Q9HBR0 1119 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 FBXO40Q9UH90 709 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 MKL2Q9ULH7 1088 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 SNX14Q9Y5W7 946 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 PARP14Q460N5 1801 aa8.84□□□□□ -0.99
CASP4-212ENST00000533730 BPNT1O95861 308 aa8.83□□□□□ -1
CASP4-212ENST00000533730 IMPDH2P12268 514 aa8.83□□□□□ -1
CASP4-212ENST00000533730 NID1P14543 1247 aa8.83□□□□□ -1
CASP4-212ENST00000533730 CTGFP29279 349 aa8.83□□□□□ -1
CASP4-212ENST00000533730 KIF5BP33176 963 aa8.83□□□□□ -1
CASP4-212ENST00000533730 AFF1P51825 1210 aaKnown RBP8.83□□□□□ -1
CASP4-212ENST00000533730 ATP11AP98196 1134 aa8.83□□□□□ -1
CASP4-212ENST00000533730 EXOSC10Q01780 885 aaKnown RBP8.83□□□□□ -1
CASP4-212ENST00000533730 PPP2R3AQ06190 1150 aa8.83□□□□□ -1
CASP4-212ENST00000533730 TRAF1Q13077 416 aa8.83□□□□□ -1
CASP4-212ENST00000533730 TMEM132BQ14DG7 1078 aa8.83□□□□□ -1
CASP4-212ENST00000533730 WDR78Q5VTH9 848 aa8.83□□□□□ -1
CASP4-212ENST00000533730 SNRNP48Q6IEG0 339 aaKnown RBP8.83□□□□□ -1
CASP4-212ENST00000533730 RUFY4Q6ZNE9 571 aa8.83□□□□□ -1
CASP4-212ENST00000533730 CHST3Q7LGC8 479 aa8.83□□□□□ -1
CASP4-212ENST00000533730 GPR142Q7Z601 462 aa8.83□□□□□ -1
CASP4-212ENST00000533730 NBPF11Q86T75 865 aa8.83□□□□□ -1
CASP4-212ENST00000533730 SGMS1Q86VZ5 419 aa8.83□□□□□ -1
CASP4-212ENST00000533730 BEND7Q8N7W2 519 aaPredicted RBP8.83□□□□□ -1
CASP4-212ENST00000533730 RBBP8NLQ8NC74 664 aaPredicted RBP8.83□□□□□ -1
CASP4-212ENST00000533730 CHST13Q8NET6 341 aa8.83□□□□□ -1
CASP4-212ENST00000533730 REPS2Q8NFH8 660 aa8.83□□□□□ -1
CASP4-212ENST00000533730 CTCFLQ8NI51 663 aaPredicted RBP8.83□□□□□ -1
CASP4-212ENST00000533730 NUDT8Q8WV74 236 aa8.83□□□□□ -1
CASP4-212ENST00000533730 SCARF2Q96GP6 870 aaPredicted RBP8.83□□□□□ -1
CASP4-212ENST00000533730 JAKMIP1Q96N16 626 aaKnown RBP8.83□□□□□ -1
CASP4-212ENST00000533730 TM6SF1Q9BZW5 370 aa8.83□□□□□ -1
CASP4-212ENST00000533730 PORCNQ9H237 461 aa8.83□□□□□ -1
CASP4-212ENST00000533730 RASSF4Q9H2L5 321 aa8.83□□□□□ -1
CASP4-212ENST00000533730 LY9Q9HBG7 655 aa8.83□□□□□ -1
CASP4-212ENST00000533730 SLC5A4Q9NY91 659 aa8.83□□□□□ -1
CASP4-212ENST00000533730 ZNF214Q9UL59 606 aaPredicted RBP8.83□□□□□ -1
CASP4-212ENST00000533730 SAMM50Q9Y512 469 aa8.83□□□□□ -1
CASP4-212ENST00000533730 MGAMO43451 1857 aa8.83□□□□□ -1
CASP4-212ENST00000533730 FRMPD2Q68DX3 1309 aaPredicted RBP8.82□□□□□ -1
CASP4-212ENST00000533730 ASMTLO95671 621 aa8.82□□□□□ -1
CASP4-212ENST00000533730 ICAM1P05362 532 aa8.82□□□□□ -1
CASP4-212ENST00000533730 FCER1AP12319 257 aa8.82□□□□□ -1
CASP4-212ENST00000533730 EIF2AK2P19525 551 aaKnown RBP8.82□□□□□ -1
CASP4-212ENST00000533730 CASTP20810 708 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms